RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
SMARCC2-203ENST00000394023 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
SMARCC2-203ENST00000394023 SHROOM4Q9ULL8 1493 aa33.26■■■□□ 2.92
SMARCC2-203ENST00000394023 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
SMARCC2-203ENST00000394023 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
SMARCC2-203ENST00000394023 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
SMARCC2-203ENST00000394023 CHIC1Q5VXU3 224 aa30.88■■■□□ 2.53
SMARCC2-203ENST00000394023 EHMT2Q96KQ7 1210 aa30.87■■■□□ 2.53
SMARCC2-203ENST00000394023 FAM9AQ8IZU1 332 aaPredicted RBP30.65■■■□□ 2.5
SMARCC2-203ENST00000394023 ABCC9O60706 1549 aa30.56■■■□□ 2.48
SMARCC2-203ENST00000394023 PCGF6Q9BYE7 350 aa30.54■■■□□ 2.48
SMARCC2-203ENST00000394023 LOC105371045A0A1W2PR82 267 aa30.43■■■□□ 2.46
SMARCC2-203ENST00000394023 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
SMARCC2-203ENST00000394023 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
SMARCC2-203ENST00000394023 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
SMARCC2-203ENST00000394023 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
SMARCC2-203ENST00000394023 TTBK1Q5TCY1 1321 aaPredicted RBP29.74■■■□□ 2.35
SMARCC2-203ENST00000394023 PABPN1Q86U42 306 aaKnown RBP eCLIP29.74■■■□□ 2.35
SMARCC2-203ENST00000394023 PPARGC1BQ86YN6 1023 aaKnown RBP29.71■■■□□ 2.35
SMARCC2-203ENST00000394023 HRCP23327 699 aa29.69■■■□□ 2.34
SMARCC2-203ENST00000394023 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
SMARCC2-203ENST00000394023 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
SMARCC2-203ENST00000394023 RANGAP1P46060 587 aaPredicted RBP29.37■■■□□ 2.29
SMARCC2-203ENST00000394023 UBTFP17480 764 aaKnown RBP29.35■■■□□ 2.29
SMARCC2-203ENST00000394023 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
SMARCC2-203ENST00000394023 NACADO15069 1562 aa29.3■■■□□ 2.28
SMARCC2-203ENST00000394023 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
SMARCC2-203ENST00000394023 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
SMARCC2-203ENST00000394023 CCER1Q8TC90 406 aaPredicted RBP29.02■■■□□ 2.24
SMARCC2-203ENST00000394023 APLP2Q06481 763 aa29■■■□□ 2.23
SMARCC2-203ENST00000394023 ZEB1P37275 1124 aaPredicted RBP28.97■■■□□ 2.23
SMARCC2-203ENST00000394023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.78■■■□□ 2.2
SMARCC2-203ENST00000394023 WIZO95785 1651 aa28.75■■■□□ 2.19
SMARCC2-203ENST00000394023 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.19
SMARCC2-203ENST00000394023 CSRNP3Q8WYN3 585 aa28.69■■■□□ 2.18
SMARCC2-203ENST00000394023 HNRNPUL2Q1KMD3 747 aaKnown RBP28.53■■■□□ 2.16
SMARCC2-203ENST00000394023 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
SMARCC2-203ENST00000394023 ATP1B4Q9UN42 357 aaPredicted RBP28.42■■■□□ 2.14
SMARCC2-203ENST00000394023 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
SMARCC2-203ENST00000394023 SOGA1O94964 1423 aa28.32■■■□□ 2.12
SMARCC2-203ENST00000394023 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
SMARCC2-203ENST00000394023 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
SMARCC2-203ENST00000394023 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
SMARCC2-203ENST00000394023 ITGAEP38570 1179 aa28.21■■■□□ 2.11
SMARCC2-203ENST00000394023 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
SMARCC2-203ENST00000394023 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
SMARCC2-203ENST00000394023 TNIKQ9UKE5 1360 aa28.01■■■□□ 2.07
SMARCC2-203ENST00000394023 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
SMARCC2-203ENST00000394023 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
SMARCC2-203ENST00000394023 YTHDC1Q96MU7 727 aaKnown RBP27.98■■■□□ 2.07
SMARCC2-203ENST00000394023 EEA1Q15075 1411 aa27.97■■■□□ 2.07
SMARCC2-203ENST00000394023 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
SMARCC2-203ENST00000394023 DIEXFQ68CQ4 756 aaKnown RBP27.94■■■□□ 2.06
SMARCC2-203ENST00000394023 CLIP1P30622 1438 aa27.92■■■□□ 2.06
SMARCC2-203ENST00000394023 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
SMARCC2-203ENST00000394023 P3H3Q8IVL6 736 aa27.87■■■□□ 2.05
SMARCC2-203ENST00000394023 CENPBP07199 599 aaPredicted RBP27.84■■■□□ 2.05
SMARCC2-203ENST00000394023 CEP164Q9UPV0 1460 aa27.76■■■□□ 2.03
SMARCC2-203ENST00000394023 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
SMARCC2-203ENST00000394023 FAM50AQ14320 339 aaKnown RBP27.67■■■□□ 2.02
SMARCC2-203ENST00000394023 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
SMARCC2-203ENST00000394023 ZNF316A6NFI3 1004 aaPredicted RBP27.6■■■□□ 2.01
SMARCC2-203ENST00000394023 RAPGEF2Q9Y4G8 1499 aa27.53■■■□□ 2
SMARCC2-203ENST00000394023 KIF27Q86VH2 1401 aa27.52■■■□□ 2
SMARCC2-203ENST00000394023 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
SMARCC2-203ENST00000394023 NEUROD1Q13562 356 aa27.41■■□□□ 1.98
SMARCC2-203ENST00000394023 VPS8Q8N3P4 1428 aa27.41■■□□□ 1.98
SMARCC2-203ENST00000394023 KANK4Q5T7N3 995 aaPredicted RBP27.38■■□□□ 1.97
SMARCC2-203ENST00000394023 ARID3CA6NKF2 412 aa27.36■■□□□ 1.97
SMARCC2-203ENST00000394023 CUX2O14529 1486 aa27.34■■□□□ 1.97
SMARCC2-203ENST00000394023 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
SMARCC2-203ENST00000394023 GTF3C3Q9Y5Q9 886 aa27.27■■□□□ 1.96
SMARCC2-203ENST00000394023 ACIN1Q9UKV3 1341 aaKnown RBP27.27■■□□□ 1.96
SMARCC2-203ENST00000394023 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
SMARCC2-203ENST00000394023 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
SMARCC2-203ENST00000394023 SCAF1Q9H7N4 1312 aaKnown RBP27.22■■□□□ 1.95
SMARCC2-203ENST00000394023 CADPSQ9ULU8 1353 aa27.21■■□□□ 1.95
SMARCC2-203ENST00000394023 MIER1Q8N108 512 aa27.15■■□□□ 1.94
SMARCC2-203ENST00000394023 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
SMARCC2-203ENST00000394023 FBLN2P98095 1184 aa27.11■■□□□ 1.93
SMARCC2-203ENST00000394023 TRIM52Q96A61 297 aa27.04■■□□□ 1.92
SMARCC2-203ENST00000394023 KIF21BO75037 1637 aa27■■□□□ 1.91
SMARCC2-203ENST00000394023 CFTRP13569 1480 aa26.99■■□□□ 1.91
SMARCC2-203ENST00000394023 CCNB3Q8WWL7 1395 aa26.99■■□□□ 1.91
SMARCC2-203ENST00000394023 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
SMARCC2-203ENST00000394023 CUX1P39880 1505 aa26.97■■□□□ 1.91
SMARCC2-203ENST00000394023 IGF1RP08069 1367 aa26.97■■□□□ 1.91
SMARCC2-203ENST00000394023 TDRD9Q8NDG6 1382 aaKnown RBP26.96■■□□□ 1.91
SMARCC2-203ENST00000394023 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
SMARCC2-203ENST00000394023 MTUS2Q5JR59 1369 aa26.93■■□□□ 1.9
SMARCC2-203ENST00000394023 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
SMARCC2-203ENST00000394023 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
SMARCC2-203ENST00000394023 FGD5Q6ZNL6 1462 aa26.9■■□□□ 1.9
SMARCC2-203ENST00000394023 HIRIP3Q9BW71 556 aaPredicted RBP26.9■■□□□ 1.9
SMARCC2-203ENST00000394023 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
SMARCC2-203ENST00000394023 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
SMARCC2-203ENST00000394023 SIN3AQ96ST3 1273 aa26.86■■□□□ 1.89
SMARCC2-203ENST00000394023 PELP1Q8IZL8 1130 aaKnown RBP26.85■■□□□ 1.89
SMARCC2-203ENST00000394023 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
SMARCC2-203ENST00000394023 CNGB1Q14028 1251 aaPredicted RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms