RNA–Protein interactions for RNA: ENST00000290583.8

CELF3-201, Transcript of CUGBP Elav-like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CELF3, Length 3,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF3-201ENST00000290583 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
CELF3-201ENST00000290583 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
CELF3-201ENST00000290583 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
CELF3-201ENST00000290583 HRCP23327 699 aa28.24■■■□□ 2.11
CELF3-201ENST00000290583 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
CELF3-201ENST00000290583 PPARGC1BQ86YN6 1023 aaKnown RBP27.91■■■□□ 2.06
CELF3-201ENST00000290583 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
CELF3-201ENST00000290583 ABCC9O60706 1549 aa27.78■■■□□ 2.04
CELF3-201ENST00000290583 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
CELF3-201ENST00000290583 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
CELF3-201ENST00000290583 PCGF6Q9BYE7 350 aa27.69■■■□□ 2.02
CELF3-201ENST00000290583 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
CELF3-201ENST00000290583 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
CELF3-201ENST00000290583 NACADO15069 1562 aa27.25■■□□□ 1.95
CELF3-201ENST00000290583 SCRIBQ14160 1630 aa27.1■■□□□ 1.93
CELF3-201ENST00000290583 SCAF1Q9H7N4 1312 aaKnown RBP27.05■■□□□ 1.92
CELF3-201ENST00000290583 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
CELF3-201ENST00000290583 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
CELF3-201ENST00000290583 MYT1Q01538 1121 aa26.73■■□□□ 1.87
CELF3-201ENST00000290583 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
CELF3-201ENST00000290583 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
CELF3-201ENST00000290583 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
CELF3-201ENST00000290583 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
CELF3-201ENST00000290583 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
CELF3-201ENST00000290583 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
CELF3-201ENST00000290583 BICRAQ9NZM4 1560 aa26.22■■□□□ 1.79
CELF3-201ENST00000290583 NEUROD1Q13562 356 aa26.2■■□□□ 1.78
CELF3-201ENST00000290583 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.78
CELF3-201ENST00000290583 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
CELF3-201ENST00000290583 GTF3C3Q9Y5Q9 886 aa26.14■■□□□ 1.77
CELF3-201ENST00000290583 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
CELF3-201ENST00000290583 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
CELF3-201ENST00000290583 WIZO95785 1651 aa25.9■■□□□ 1.74
CELF3-201ENST00000290583 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
CELF3-201ENST00000290583 CENPBP07199 599 aaPredicted RBP25.82■■□□□ 1.72
CELF3-201ENST00000290583 DIEXFQ68CQ4 756 aaKnown RBP25.59■■□□□ 1.69
CELF3-201ENST00000290583 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
CELF3-201ENST00000290583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
CELF3-201ENST00000290583 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
CELF3-201ENST00000290583 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
CELF3-201ENST00000290583 YTHDC1Q96MU7 727 aaKnown RBP25.47■■□□□ 1.67
CELF3-201ENST00000290583 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
CELF3-201ENST00000290583 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
CELF3-201ENST00000290583 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
CELF3-201ENST00000290583 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
CELF3-201ENST00000290583 FAM9AQ8IZU1 332 aaPredicted RBP25.38■■□□□ 1.65
CELF3-201ENST00000290583 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
CELF3-201ENST00000290583 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
CELF3-201ENST00000290583 BCL11AQ9H165 835 aa25.25■■□□□ 1.63
CELF3-201ENST00000290583 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
CELF3-201ENST00000290583 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
CELF3-201ENST00000290583 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
CELF3-201ENST00000290583 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.61
CELF3-201ENST00000290583 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
CELF3-201ENST00000290583 ANP32EQ9BTT0 268 aa24.92■■□□□ 1.58
CELF3-201ENST00000290583 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
CELF3-201ENST00000290583 MIER1Q8N108 512 aa24.91■■□□□ 1.58
CELF3-201ENST00000290583 ZNF316A6NFI3 1004 aaPredicted RBP24.9■■□□□ 1.58
CELF3-201ENST00000290583 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
CELF3-201ENST00000290583 TSHZ2Q9NRE2 1034 aa24.69■■□□□ 1.54
CELF3-201ENST00000290583 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
CELF3-201ENST00000290583 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
CELF3-201ENST00000290583 CFTRP13569 1480 aa24.64■■□□□ 1.54
CELF3-201ENST00000290583 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
CELF3-201ENST00000290583 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
CELF3-201ENST00000290583 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
CELF3-201ENST00000290583 PRKCSHP14314 528 aaPredicted RBP24.5■■□□□ 1.51
CELF3-201ENST00000290583 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
CELF3-201ENST00000290583 SOGA1O94964 1423 aa24.44■■□□□ 1.5
CELF3-201ENST00000290583 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
CELF3-201ENST00000290583 NESP48681 1621 aa24.41■■□□□ 1.5
CELF3-201ENST00000290583 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
CELF3-201ENST00000290583 CUX1P39880 1505 aa24.37■■□□□ 1.49
CELF3-201ENST00000290583 BCANQ96GW7 911 aa24.37■■□□□ 1.49
CELF3-201ENST00000290583 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
CELF3-201ENST00000290583 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
CELF3-201ENST00000290583 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
CELF3-201ENST00000290583 EEA1Q15075 1411 aa24.3■■□□□ 1.48
CELF3-201ENST00000290583 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
CELF3-201ENST00000290583 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
CELF3-201ENST00000290583 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
CELF3-201ENST00000290583 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
CELF3-201ENST00000290583 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
CELF3-201ENST00000290583 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
CELF3-201ENST00000290583 RBM19Q9Y4C8 960 aaKnown RBP24.09■■□□□ 1.45
CELF3-201ENST00000290583 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
CELF3-201ENST00000290583 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
CELF3-201ENST00000290583 FKBP8Q14318 412 aa24.05■■□□□ 1.44
CELF3-201ENST00000290583 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
CELF3-201ENST00000290583 UBTFP17480 764 aaKnown RBP24.04■■□□□ 1.44
CELF3-201ENST00000290583 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
CELF3-201ENST00000290583 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
CELF3-201ENST00000290583 KIF21BO75037 1637 aa24.01■■□□□ 1.43
CELF3-201ENST00000290583 CUX2O14529 1486 aa23.99■■□□□ 1.43
CELF3-201ENST00000290583 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
CELF3-201ENST00000290583 ITGAEP38570 1179 aa23.95■■□□□ 1.43
CELF3-201ENST00000290583 TNIKQ9UKE5 1360 aa23.95■■□□□ 1.42
CELF3-201ENST00000290583 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
CELF3-201ENST00000290583 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
CELF3-201ENST00000290583 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms