RNA–Protein interactions for RNA: ENST00000290583.8

CELF3-201, Transcript of CUGBP Elav-like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CELF3, Length 3,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF3-201ENST00000290583 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
CELF3-201ENST00000290583 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
CELF3-201ENST00000290583 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
CELF3-201ENST00000290583 HRCP23327 699 aa28.24■■■□□ 2.11
CELF3-201ENST00000290583 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
CELF3-201ENST00000290583 PPARGC1BQ86YN6 1023 aaKnown RBP27.91■■■□□ 2.06
CELF3-201ENST00000290583 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
CELF3-201ENST00000290583 ABCC9O60706 1549 aa27.78■■■□□ 2.04
CELF3-201ENST00000290583 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
CELF3-201ENST00000290583 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
CELF3-201ENST00000290583 PCGF6Q9BYE7 350 aa27.69■■■□□ 2.02
CELF3-201ENST00000290583 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
CELF3-201ENST00000290583 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
CELF3-201ENST00000290583 NACADO15069 1562 aa27.25■■□□□ 1.95
CELF3-201ENST00000290583 SCRIBQ14160 1630 aa27.1■■□□□ 1.93
CELF3-201ENST00000290583 SCAF1Q9H7N4 1312 aaKnown RBP27.05■■□□□ 1.92
CELF3-201ENST00000290583 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
CELF3-201ENST00000290583 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
CELF3-201ENST00000290583 MYT1Q01538 1121 aa26.73■■□□□ 1.87
CELF3-201ENST00000290583 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
CELF3-201ENST00000290583 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
CELF3-201ENST00000290583 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
CELF3-201ENST00000290583 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
CELF3-201ENST00000290583 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
CELF3-201ENST00000290583 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
CELF3-201ENST00000290583 BICRAQ9NZM4 1560 aa26.22■■□□□ 1.79
CELF3-201ENST00000290583 NEUROD1Q13562 356 aa26.2■■□□□ 1.78
CELF3-201ENST00000290583 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.78
CELF3-201ENST00000290583 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
CELF3-201ENST00000290583 GTF3C3Q9Y5Q9 886 aa26.14■■□□□ 1.77
CELF3-201ENST00000290583 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
CELF3-201ENST00000290583 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
CELF3-201ENST00000290583 WIZO95785 1651 aa25.9■■□□□ 1.74
CELF3-201ENST00000290583 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
CELF3-201ENST00000290583 CENPBP07199 599 aaPredicted RBP25.82■■□□□ 1.72
CELF3-201ENST00000290583 DIEXFQ68CQ4 756 aaKnown RBP25.59■■□□□ 1.69
CELF3-201ENST00000290583 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
CELF3-201ENST00000290583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
CELF3-201ENST00000290583 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
CELF3-201ENST00000290583 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
CELF3-201ENST00000290583 YTHDC1Q96MU7 727 aaKnown RBP25.47■■□□□ 1.67
CELF3-201ENST00000290583 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
CELF3-201ENST00000290583 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
CELF3-201ENST00000290583 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
CELF3-201ENST00000290583 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
CELF3-201ENST00000290583 FAM9AQ8IZU1 332 aaPredicted RBP25.38■■□□□ 1.65
CELF3-201ENST00000290583 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
CELF3-201ENST00000290583 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
CELF3-201ENST00000290583 BCL11AQ9H165 835 aa25.25■■□□□ 1.63
CELF3-201ENST00000290583 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
CELF3-201ENST00000290583 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
CELF3-201ENST00000290583 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
CELF3-201ENST00000290583 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.61
CELF3-201ENST00000290583 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
CELF3-201ENST00000290583 ANP32EQ9BTT0 268 aa24.92■■□□□ 1.58
CELF3-201ENST00000290583 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
CELF3-201ENST00000290583 MIER1Q8N108 512 aa24.91■■□□□ 1.58
CELF3-201ENST00000290583 ZNF316A6NFI3 1004 aaPredicted RBP24.9■■□□□ 1.58
CELF3-201ENST00000290583 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
CELF3-201ENST00000290583 TSHZ2Q9NRE2 1034 aa24.69■■□□□ 1.54
CELF3-201ENST00000290583 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
CELF3-201ENST00000290583 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
CELF3-201ENST00000290583 CFTRP13569 1480 aa24.64■■□□□ 1.54
CELF3-201ENST00000290583 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
CELF3-201ENST00000290583 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
CELF3-201ENST00000290583 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
CELF3-201ENST00000290583 PRKCSHP14314 528 aaPredicted RBP24.5■■□□□ 1.51
CELF3-201ENST00000290583 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
CELF3-201ENST00000290583 SOGA1O94964 1423 aa24.44■■□□□ 1.5
CELF3-201ENST00000290583 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
CELF3-201ENST00000290583 NESP48681 1621 aa24.41■■□□□ 1.5
CELF3-201ENST00000290583 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
CELF3-201ENST00000290583 CUX1P39880 1505 aa24.37■■□□□ 1.49
CELF3-201ENST00000290583 BCANQ96GW7 911 aa24.37■■□□□ 1.49
CELF3-201ENST00000290583 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
CELF3-201ENST00000290583 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
CELF3-201ENST00000290583 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
CELF3-201ENST00000290583 EEA1Q15075 1411 aa24.3■■□□□ 1.48
CELF3-201ENST00000290583 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
CELF3-201ENST00000290583 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
CELF3-201ENST00000290583 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
CELF3-201ENST00000290583 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
CELF3-201ENST00000290583 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
CELF3-201ENST00000290583 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
CELF3-201ENST00000290583 RBM19Q9Y4C8 960 aaKnown RBP24.09■■□□□ 1.45
CELF3-201ENST00000290583 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
CELF3-201ENST00000290583 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
CELF3-201ENST00000290583 FKBP8Q14318 412 aa24.05■■□□□ 1.44
CELF3-201ENST00000290583 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
CELF3-201ENST00000290583 UBTFP17480 764 aaKnown RBP24.04■■□□□ 1.44
CELF3-201ENST00000290583 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
CELF3-201ENST00000290583 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
CELF3-201ENST00000290583 KIF21BO75037 1637 aa24.01■■□□□ 1.43
CELF3-201ENST00000290583 CUX2O14529 1486 aa23.99■■□□□ 1.43
CELF3-201ENST00000290583 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
CELF3-201ENST00000290583 ITGAEP38570 1179 aa23.95■■□□□ 1.43
CELF3-201ENST00000290583 TNIKQ9UKE5 1360 aa23.95■■□□□ 1.42
CELF3-201ENST00000290583 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
CELF3-201ENST00000290583 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
CELF3-201ENST00000290583 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms