RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
KDM5C-205ENST00000404049 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
KDM5C-205ENST00000404049 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
KDM5C-205ENST00000404049 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
KDM5C-205ENST00000404049 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.45
KDM5C-205ENST00000404049 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
KDM5C-205ENST00000404049 MYT1Q01538 1121 aa24.02■■□□□ 1.44
KDM5C-205ENST00000404049 ERICH6Q7L0X2 663 aa23.89■■□□□ 1.42
KDM5C-205ENST00000404049 CCER1Q8TC90 406 aaPredicted RBP23.77■■□□□ 1.4
KDM5C-205ENST00000404049 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
KDM5C-205ENST00000404049 APLP2Q06481 763 aa23.58■■□□□ 1.36
KDM5C-205ENST00000404049 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
KDM5C-205ENST00000404049 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
KDM5C-205ENST00000404049 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
KDM5C-205ENST00000404049 ZEB1P37275 1124 aaPredicted RBP23.35■■□□□ 1.33
KDM5C-205ENST00000404049 NEFLP07196 543 aa23.01■■□□□ 1.27
KDM5C-205ENST00000404049 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
KDM5C-205ENST00000404049 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
KDM5C-205ENST00000404049 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
KDM5C-205ENST00000404049 HRCP23327 699 aa22.62■■□□□ 1.21
KDM5C-205ENST00000404049 ATP1B4Q9UN42 357 aaPredicted RBP22.6■■□□□ 1.21
KDM5C-205ENST00000404049 DAXXQ9UER7 740 aaPredicted RBP22.58■■□□□ 1.21
KDM5C-205ENST00000404049 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
KDM5C-205ENST00000404049 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
KDM5C-205ENST00000404049 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
KDM5C-205ENST00000404049 RTL5Q5HYW3 569 aaPredicted RBP22.22■■□□□ 1.15
KDM5C-205ENST00000404049 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
KDM5C-205ENST00000404049 ITGAEP38570 1179 aa22.02■■□□□ 1.12
KDM5C-205ENST00000404049 POLR3GLQ9BT43 218 aa22■■□□□ 1.11
KDM5C-205ENST00000404049 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
KDM5C-205ENST00000404049 DIEXFQ68CQ4 756 aaKnown RBP21.98■■□□□ 1.11
KDM5C-205ENST00000404049 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
KDM5C-205ENST00000404049 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
KDM5C-205ENST00000404049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
KDM5C-205ENST00000404049 CNGB1Q14028 1251 aaPredicted RBP21.84■■□□□ 1.09
KDM5C-205ENST00000404049 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
KDM5C-205ENST00000404049 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
KDM5C-205ENST00000404049 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
KDM5C-205ENST00000404049 BCANQ96GW7 911 aa21.68■■□□□ 1.06
KDM5C-205ENST00000404049 CDK11AQ9UQ88 783 aaPredicted RBP21.5■■□□□ 1.03
KDM5C-205ENST00000404049 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
KDM5C-205ENST00000404049 ACIN1Q9UKV3 1341 aaKnown RBP21.43■■□□□ 1.02
KDM5C-205ENST00000404049 GLIPR1L2Q4G1C9 344 aa21.41■■□□□ 1.02
KDM5C-205ENST00000404049 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
KDM5C-205ENST00000404049 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
KDM5C-205ENST00000404049 ANP32CO43423 234 aa21.37■■□□□ 1.01
KDM5C-205ENST00000404049 EIF5BO60841 1220 aaKnown RBP21.31■■□□□ 1
KDM5C-205ENST00000404049 TRIM52Q96A61 297 aa21.28■■□□□ 1
KDM5C-205ENST00000404049 ABCC9O60706 1549 aa21.22■□□□□ 0.99
KDM5C-205ENST00000404049 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
KDM5C-205ENST00000404049 ANP32AP39687 249 aaKnown RBP21.16■□□□□ 0.98
KDM5C-205ENST00000404049 ANP32BQ92688 251 aaKnown RBP21.11■□□□□ 0.97
KDM5C-205ENST00000404049 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
KDM5C-205ENST00000404049 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
KDM5C-205ENST00000404049 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
KDM5C-205ENST00000404049 FKBP8Q14318 412 aa21■□□□□ 0.95
KDM5C-205ENST00000404049 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
KDM5C-205ENST00000404049 BCL11AQ9H165 835 aa20.91■□□□□ 0.94
KDM5C-205ENST00000404049 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
KDM5C-205ENST00000404049 FBLN2P98095 1184 aa20.76■□□□□ 0.91
KDM5C-205ENST00000404049 NBR1Q14596 966 aa20.76■□□□□ 0.91
KDM5C-205ENST00000404049 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
KDM5C-205ENST00000404049 HNRNPUQ00839 825 aaKnown RBP eCLIP20.73■□□□□ 0.91
KDM5C-205ENST00000404049 HSP90AA1P07900 732 aaKnown RBP20.71■□□□□ 0.91
KDM5C-205ENST00000404049 NEFMP07197 916 aa20.71■□□□□ 0.91
KDM5C-205ENST00000404049 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
KDM5C-205ENST00000404049 UPF2Q9HAU5 1272 aaKnown RBP20.68■□□□□ 0.9
KDM5C-205ENST00000404049 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
KDM5C-205ENST00000404049 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
KDM5C-205ENST00000404049 FAM9BQ8IZU0 186 aa20.64■□□□□ 0.9
KDM5C-205ENST00000404049 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
KDM5C-205ENST00000404049 TONSLQ96HA7 1378 aa20.6■□□□□ 0.89
KDM5C-205ENST00000404049 CCDC136Q96JN2 1154 aa20.58■□□□□ 0.89
KDM5C-205ENST00000404049 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
KDM5C-205ENST00000404049 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
KDM5C-205ENST00000404049 MIER1Q8N108 512 aa20.53■□□□□ 0.88
KDM5C-205ENST00000404049 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
KDM5C-205ENST00000404049 ARXQ96QS3 562 aa20.52■□□□□ 0.88
KDM5C-205ENST00000404049 SALL2Q9Y467 1007 aaPredicted RBP20.5■□□□□ 0.87
KDM5C-205ENST00000404049 IRX6P78412 446 aaPredicted RBP20.48■□□□□ 0.87
KDM5C-205ENST00000404049 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
KDM5C-205ENST00000404049 TMC1Q8TDI8 760 aa20.39■□□□□ 0.86
KDM5C-205ENST00000404049 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.38■□□□□ 0.85
KDM5C-205ENST00000404049 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
KDM5C-205ENST00000404049 TRIM44Q96DX7 344 aaPredicted RBP20.37■□□□□ 0.85
KDM5C-205ENST00000404049 ESF1Q9H501 851 aaKnown RBP20.35■□□□□ 0.85
KDM5C-205ENST00000404049 CDK11BP21127 795 aaKnown RBP20.31■□□□□ 0.84
KDM5C-205ENST00000404049 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
KDM5C-205ENST00000404049 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
KDM5C-205ENST00000404049 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
KDM5C-205ENST00000404049 STAG3Q9UJ98 1225 aa20.27■□□□□ 0.84
KDM5C-205ENST00000404049 CHGAP10645 457 aaKnown RBP20.27■□□□□ 0.83
KDM5C-205ENST00000404049 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
KDM5C-205ENST00000404049 ERICH6BQ5W0A0 696 aa20.24■□□□□ 0.83
KDM5C-205ENST00000404049 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
KDM5C-205ENST00000404049 BECN1Q14457 450 aa20.19■□□□□ 0.82
KDM5C-205ENST00000404049 NCLP19338 710 aaKnown RBP20.18■□□□□ 0.82
KDM5C-205ENST00000404049 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
KDM5C-205ENST00000404049 GOLGA6L22H0YM25 854 aa20.16■□□□□ 0.82
KDM5C-205ENST00000404049 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms