RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
UBE2R2-201ENST00000263228 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
UBE2R2-201ENST00000263228 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
UBE2R2-201ENST00000263228 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
UBE2R2-201ENST00000263228 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
UBE2R2-201ENST00000263228 PCGF6Q9BYE7 350 aa27.67■■■□□ 2.02
UBE2R2-201ENST00000263228 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
UBE2R2-201ENST00000263228 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
UBE2R2-201ENST00000263228 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
UBE2R2-201ENST00000263228 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
UBE2R2-201ENST00000263228 HRCP23327 699 aa26.65■■□□□ 1.86
UBE2R2-201ENST00000263228 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
UBE2R2-201ENST00000263228 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
UBE2R2-201ENST00000263228 CCER1Q8TC90 406 aaPredicted RBP26.15■■□□□ 1.78
UBE2R2-201ENST00000263228 RANGAP1P46060 587 aaPredicted RBP26.14■■□□□ 1.77
UBE2R2-201ENST00000263228 YTHDC1Q96MU7 727 aaKnown RBP26.09■■□□□ 1.77
UBE2R2-201ENST00000263228 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
UBE2R2-201ENST00000263228 TRIM26Q12899 539 aaPredicted RBP25.99■■□□□ 1.75
UBE2R2-201ENST00000263228 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
UBE2R2-201ENST00000263228 ZEB1P37275 1124 aaPredicted RBP25.83■■□□□ 1.73
UBE2R2-201ENST00000263228 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
UBE2R2-201ENST00000263228 CENPBP07199 599 aaPredicted RBP25.74■■□□□ 1.71
UBE2R2-201ENST00000263228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.72■■□□□ 1.71
UBE2R2-201ENST00000263228 APLP2Q06481 763 aa25.63■■□□□ 1.69
UBE2R2-201ENST00000263228 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
UBE2R2-201ENST00000263228 PELP1Q8IZL8 1130 aaKnown RBP25.57■■□□□ 1.68
UBE2R2-201ENST00000263228 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
UBE2R2-201ENST00000263228 ABCC9O60706 1549 aa25.28■■□□□ 1.64
UBE2R2-201ENST00000263228 DIEXFQ68CQ4 756 aaKnown RBP25.25■■□□□ 1.63
UBE2R2-201ENST00000263228 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
UBE2R2-201ENST00000263228 ATP1B4Q9UN42 357 aaPredicted RBP25.15■■□□□ 1.62
UBE2R2-201ENST00000263228 ITGAEP38570 1179 aa25.13■■□□□ 1.61
UBE2R2-201ENST00000263228 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
UBE2R2-201ENST00000263228 DCAF1Q9Y4B6 1507 aa25■■□□□ 1.59
UBE2R2-201ENST00000263228 SCRIBQ14160 1630 aa24.89■■□□□ 1.57
UBE2R2-201ENST00000263228 NEUROD1Q13562 356 aa24.86■■□□□ 1.57
UBE2R2-201ENST00000263228 ACIN1Q9UKV3 1341 aaKnown RBP24.85■■□□□ 1.57
UBE2R2-201ENST00000263228 BCANQ96GW7 911 aa24.76■■□□□ 1.55
UBE2R2-201ENST00000263228 CNGB1Q14028 1251 aaPredicted RBP24.76■■□□□ 1.55
UBE2R2-201ENST00000263228 ERICH6Q7L0X2 663 aa24.71■■□□□ 1.55
UBE2R2-201ENST00000263228 NEFLP07196 543 aa24.63■■□□□ 1.53
UBE2R2-201ENST00000263228 MYT1Q01538 1121 aa24.53■■□□□ 1.52
UBE2R2-201ENST00000263228 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
UBE2R2-201ENST00000263228 NACADO15069 1562 aa24.48■■□□□ 1.51
UBE2R2-201ENST00000263228 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
UBE2R2-201ENST00000263228 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
UBE2R2-201ENST00000263228 POLR3GLQ9BT43 218 aa24.36■■□□□ 1.49
UBE2R2-201ENST00000263228 MIER1Q8N108 512 aa24.31■■□□□ 1.48
UBE2R2-201ENST00000263228 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
UBE2R2-201ENST00000263228 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
UBE2R2-201ENST00000263228 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
UBE2R2-201ENST00000263228 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
UBE2R2-201ENST00000263228 HIRIP3Q9BW71 556 aaPredicted RBP24.04■■□□□ 1.44
UBE2R2-201ENST00000263228 P3H3Q8IVL6 736 aa24■■□□□ 1.43
UBE2R2-201ENST00000263228 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
UBE2R2-201ENST00000263228 FKBP8Q14318 412 aa23.96■■□□□ 1.43
UBE2R2-201ENST00000263228 DDX10Q13206 875 aaKnown RBP23.93■■□□□ 1.42
UBE2R2-201ENST00000263228 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
UBE2R2-201ENST00000263228 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
UBE2R2-201ENST00000263228 IRX6P78412 446 aaPredicted RBP23.8■■□□□ 1.4
UBE2R2-201ENST00000263228 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
UBE2R2-201ENST00000263228 WIZO95785 1651 aa23.78■■□□□ 1.4
UBE2R2-201ENST00000263228 ANP32CO43423 234 aa23.76■■□□□ 1.39
UBE2R2-201ENST00000263228 SENP3-EIF4A1A0A087X0R7 540 aa23.74■■□□□ 1.39
UBE2R2-201ENST00000263228 ZNF326Q5BKZ1 582 aaKnown RBP23.71■■□□□ 1.39
UBE2R2-201ENST00000263228 CDK11AQ9UQ88 783 aaPredicted RBP23.59■■□□□ 1.37
UBE2R2-201ENST00000263228 HNRNPUQ00839 825 aaKnown RBP eCLIP23.57■■□□□ 1.36
UBE2R2-201ENST00000263228 CEP162Q5TB80 1403 aa23.56■■□□□ 1.36
UBE2R2-201ENST00000263228 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
UBE2R2-201ENST00000263228 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
UBE2R2-201ENST00000263228 SOGA1O94964 1423 aa23.5■■□□□ 1.35
UBE2R2-201ENST00000263228 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
UBE2R2-201ENST00000263228 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
UBE2R2-201ENST00000263228 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
UBE2R2-201ENST00000263228 RTL5Q5HYW3 569 aaPredicted RBP23.47■■□□□ 1.35
UBE2R2-201ENST00000263228 SALL2Q9Y467 1007 aaPredicted RBP23.44■■□□□ 1.34
UBE2R2-201ENST00000263228 NPM2Q86SE8 214 aaKnown RBP23.44■■□□□ 1.34
UBE2R2-201ENST00000263228 DAXXQ9UER7 740 aaPredicted RBP23.42■■□□□ 1.34
UBE2R2-201ENST00000263228 NBR1Q14596 966 aa23.42■■□□□ 1.34
UBE2R2-201ENST00000263228 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
UBE2R2-201ENST00000263228 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
UBE2R2-201ENST00000263228 CHIC2Q9UKJ5 165 aa23.38■■□□□ 1.33
UBE2R2-201ENST00000263228 CLIP1P30622 1438 aa23.37■■□□□ 1.33
UBE2R2-201ENST00000263228 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
UBE2R2-201ENST00000263228 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
UBE2R2-201ENST00000263228 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
UBE2R2-201ENST00000263228 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.31
UBE2R2-201ENST00000263228 ANP32EQ9BTT0 268 aa23.26■■□□□ 1.31
UBE2R2-201ENST00000263228 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
UBE2R2-201ENST00000263228 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
UBE2R2-201ENST00000263228 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
UBE2R2-201ENST00000263228 TONSLQ96HA7 1378 aa23.22■■□□□ 1.31
UBE2R2-201ENST00000263228 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
UBE2R2-201ENST00000263228 SLC4A1APQ9BWU0 796 aaKnown RBP23.21■■□□□ 1.31
UBE2R2-201ENST00000263228 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
UBE2R2-201ENST00000263228 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
UBE2R2-201ENST00000263228 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
UBE2R2-201ENST00000263228 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
UBE2R2-201ENST00000263228 BCL11AQ9H165 835 aa23.14■■□□□ 1.3
UBE2R2-201ENST00000263228 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms