RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
PDK1-203ENST00000410055 SHROOM4Q9ULL8 1493 aa29.52■■■□□ 2.32
PDK1-203ENST00000410055 DCAF8L2P0C7V8 631 aa28.98■■■□□ 2.23
PDK1-203ENST00000410055 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
PDK1-203ENST00000410055 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
PDK1-203ENST00000410055 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
PDK1-203ENST00000410055 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
PDK1-203ENST00000410055 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
PDK1-203ENST00000410055 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.01
PDK1-203ENST00000410055 DCAF1Q9Y4B6 1507 aa27.55■■■□□ 2
PDK1-203ENST00000410055 HRCP23327 699 aa27.39■■□□□ 1.98
PDK1-203ENST00000410055 LOC105371045A0A1W2PR82 267 aa27.25■■□□□ 1.95
PDK1-203ENST00000410055 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
PDK1-203ENST00000410055 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
PDK1-203ENST00000410055 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
PDK1-203ENST00000410055 ABCC9O60706 1549 aa27.14■■□□□ 1.94
PDK1-203ENST00000410055 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
PDK1-203ENST00000410055 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
PDK1-203ENST00000410055 FAM9AQ8IZU1 332 aaPredicted RBP26.88■■□□□ 1.89
PDK1-203ENST00000410055 MYT1Q01538 1121 aa26.83■■□□□ 1.89
PDK1-203ENST00000410055 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
PDK1-203ENST00000410055 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
PDK1-203ENST00000410055 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
PDK1-203ENST00000410055 SCAF1Q9H7N4 1312 aaKnown RBP26.64■■□□□ 1.86
PDK1-203ENST00000410055 NACADO15069 1562 aa26.59■■□□□ 1.85
PDK1-203ENST00000410055 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
PDK1-203ENST00000410055 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
PDK1-203ENST00000410055 WIZO95785 1651 aa26.35■■□□□ 1.81
PDK1-203ENST00000410055 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
PDK1-203ENST00000410055 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
PDK1-203ENST00000410055 TTBK1Q5TCY1 1321 aaPredicted RBP25.94■■□□□ 1.74
PDK1-203ENST00000410055 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
PDK1-203ENST00000410055 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
PDK1-203ENST00000410055 SMARCA4P51532 1647 aa25.83■■□□□ 1.72
PDK1-203ENST00000410055 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
PDK1-203ENST00000410055 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
PDK1-203ENST00000410055 ZEB1P37275 1124 aaPredicted RBP25.71■■□□□ 1.71
PDK1-203ENST00000410055 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
PDK1-203ENST00000410055 UBTFP17480 764 aaKnown RBP25.67■■□□□ 1.7
PDK1-203ENST00000410055 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
PDK1-203ENST00000410055 SOGA1O94964 1423 aa25.65■■□□□ 1.7
PDK1-203ENST00000410055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.63■■□□□ 1.69
PDK1-203ENST00000410055 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
PDK1-203ENST00000410055 GTF3C3Q9Y5Q9 886 aa25.56■■□□□ 1.68
PDK1-203ENST00000410055 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
PDK1-203ENST00000410055 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
PDK1-203ENST00000410055 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
PDK1-203ENST00000410055 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
PDK1-203ENST00000410055 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
PDK1-203ENST00000410055 RANGAP1P46060 587 aaPredicted RBP25.47■■□□□ 1.67
PDK1-203ENST00000410055 CEP162Q5TB80 1403 aa25.44■■□□□ 1.66
PDK1-203ENST00000410055 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
PDK1-203ENST00000410055 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
PDK1-203ENST00000410055 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
PDK1-203ENST00000410055 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
PDK1-203ENST00000410055 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
PDK1-203ENST00000410055 EEA1Q15075 1411 aa25.21■■□□□ 1.63
PDK1-203ENST00000410055 PRKCSHP14314 528 aaPredicted RBP25.2■■□□□ 1.63
PDK1-203ENST00000410055 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
PDK1-203ENST00000410055 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
PDK1-203ENST00000410055 CENPBP07199 599 aaPredicted RBP25.13■■□□□ 1.61
PDK1-203ENST00000410055 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
PDK1-203ENST00000410055 HNRNPUL2Q1KMD3 747 aaKnown RBP25.12■■□□□ 1.61
PDK1-203ENST00000410055 APLP2Q06481 763 aa25.05■■□□□ 1.6
PDK1-203ENST00000410055 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
PDK1-203ENST00000410055 CLIP1P30622 1438 aa25.01■■□□□ 1.59
PDK1-203ENST00000410055 RAPGEF2Q9Y4G8 1499 aa24.96■■□□□ 1.59
PDK1-203ENST00000410055 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
PDK1-203ENST00000410055 KIF21BO75037 1637 aa24.82■■□□□ 1.56
PDK1-203ENST00000410055 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
PDK1-203ENST00000410055 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
PDK1-203ENST00000410055 NCAPD3P42695 1498 aa24.68■■□□□ 1.54
PDK1-203ENST00000410055 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
PDK1-203ENST00000410055 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
PDK1-203ENST00000410055 ANP32EQ9BTT0 268 aa24.64■■□□□ 1.54
PDK1-203ENST00000410055 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
PDK1-203ENST00000410055 CUX1P39880 1505 aa24.62■■□□□ 1.53
PDK1-203ENST00000410055 ITGAEP38570 1179 aa24.6■■□□□ 1.53
PDK1-203ENST00000410055 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
PDK1-203ENST00000410055 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
PDK1-203ENST00000410055 BIVM-ERCC5R4GMW8 1640 aa24.56■■□□□ 1.52
PDK1-203ENST00000410055 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
PDK1-203ENST00000410055 CFTRP13569 1480 aa24.51■■□□□ 1.51
PDK1-203ENST00000410055 ARAP1Q96P48 1450 aa24.47■■□□□ 1.51
PDK1-203ENST00000410055 ATP1B4Q9UN42 357 aaPredicted RBP24.47■■□□□ 1.51
PDK1-203ENST00000410055 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
PDK1-203ENST00000410055 CUX2O14529 1486 aa24.44■■□□□ 1.5
PDK1-203ENST00000410055 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
PDK1-203ENST00000410055 MIER1Q8N108 512 aa24.39■■□□□ 1.5
PDK1-203ENST00000410055 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
PDK1-203ENST00000410055 IGF1RP08069 1367 aa24.33■■□□□ 1.49
PDK1-203ENST00000410055 ARHGAP35Q9NRY4 1499 aa24.31■■□□□ 1.48
PDK1-203ENST00000410055 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
PDK1-203ENST00000410055 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
PDK1-203ENST00000410055 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.47
PDK1-203ENST00000410055 DHX57Q6P158 1386 aaKnown RBP24.25■■□□□ 1.47
PDK1-203ENST00000410055 FAM50AQ14320 339 aaKnown RBP24.21■■□□□ 1.47
PDK1-203ENST00000410055 CCNB3Q8WWL7 1395 aa24.2■■□□□ 1.46
PDK1-203ENST00000410055 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
PDK1-203ENST00000410055 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms