Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 NTF6A-201ENST00000591175 560 ntBASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 AC027702.1-201ENST00000563810 1770 ntBASIC20.72■□□□□ 0.91
CAPN7Q9Y6W3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 ATP5G2P3-201ENST00000429083 425 ntBASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 AC137630.3-201ENST00000607245 391 ntBASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN7Q9Y6W3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.91
CAPN7Q9Y6W3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 C17orf82-201ENST00000623772 1530 ntBASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 AC004987.1-201ENST00000428627 508 ntBASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 HSD17B1P1-201ENST00000590052 955 ntBASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 AC009102.2-201ENST00000606772 1639 ntBASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN7Q9Y6W3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN7Q9Y6W3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN7Q9Y6W3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 AC079089.2-201ENST00000531211 1277 ntBASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN7Q9Y6W3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms