RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
GTF2IP1-210ENST00000622829 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
GTF2IP1-210ENST00000622829 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
GTF2IP1-210ENST00000622829 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
GTF2IP1-210ENST00000622829 PCGF6Q9BYE7 350 aa30.8■■■□□ 2.52
GTF2IP1-210ENST00000622829 PPARGC1BQ86YN6 1023 aaKnown RBP30.53■■■□□ 2.48
GTF2IP1-210ENST00000622829 EHMT2Q96KQ7 1210 aa30.36■■■□□ 2.45
GTF2IP1-210ENST00000622829 HRCP23327 699 aa30.18■■■□□ 2.42
GTF2IP1-210ENST00000622829 LOC105371045A0A1W2PR82 267 aa29.8■■■□□ 2.36
GTF2IP1-210ENST00000622829 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
GTF2IP1-210ENST00000622829 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
GTF2IP1-210ENST00000622829 TTBK1Q5TCY1 1321 aaPredicted RBP29.38■■■□□ 2.29
GTF2IP1-210ENST00000622829 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
GTF2IP1-210ENST00000622829 TRIM26Q12899 539 aaPredicted RBP28.97■■■□□ 2.23
GTF2IP1-210ENST00000622829 YTHDC1Q96MU7 727 aaKnown RBP28.73■■■□□ 2.19
GTF2IP1-210ENST00000622829 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
GTF2IP1-210ENST00000622829 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
GTF2IP1-210ENST00000622829 SCAF1Q9H7N4 1312 aaKnown RBP28.65■■■□□ 2.18
GTF2IP1-210ENST00000622829 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
GTF2IP1-210ENST00000622829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
GTF2IP1-210ENST00000622829 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.16
GTF2IP1-210ENST00000622829 GTF3C3Q9Y5Q9 886 aa28.33■■■□□ 2.13
GTF2IP1-210ENST00000622829 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
GTF2IP1-210ENST00000622829 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.11
GTF2IP1-210ENST00000622829 NEUROD1Q13562 356 aa28.2■■■□□ 2.11
GTF2IP1-210ENST00000622829 DIEXFQ68CQ4 756 aaKnown RBP28.1■■■□□ 2.09
GTF2IP1-210ENST00000622829 ACIN1Q9UKV3 1341 aaKnown RBP28.03■■■□□ 2.08
GTF2IP1-210ENST00000622829 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
GTF2IP1-210ENST00000622829 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
GTF2IP1-210ENST00000622829 HNRNPUL2Q1KMD3 747 aaKnown RBP27.79■■■□□ 2.04
GTF2IP1-210ENST00000622829 UBTFP17480 764 aaKnown RBP27.75■■■□□ 2.03
GTF2IP1-210ENST00000622829 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
GTF2IP1-210ENST00000622829 APLP2Q06481 763 aa27.4■■□□□ 1.98
GTF2IP1-210ENST00000622829 BCANQ96GW7 911 aa27.36■■□□□ 1.97
GTF2IP1-210ENST00000622829 MIER1Q8N108 512 aa27.32■■□□□ 1.96
GTF2IP1-210ENST00000622829 MYT1Q01538 1121 aa27.31■■□□□ 1.96
GTF2IP1-210ENST00000622829 ZNF316A6NFI3 1004 aaPredicted RBP27.29■■□□□ 1.96
GTF2IP1-210ENST00000622829 ITGAEP38570 1179 aa27.27■■□□□ 1.96
GTF2IP1-210ENST00000622829 ABCC9O60706 1549 aa26.98■■□□□ 1.91
GTF2IP1-210ENST00000622829 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
GTF2IP1-210ENST00000622829 RSF1Q96T23 1441 aaPredicted RBP26.83■■□□□ 1.89
GTF2IP1-210ENST00000622829 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
GTF2IP1-210ENST00000622829 CNGB1Q14028 1251 aaPredicted RBP26.71■■□□□ 1.87
GTF2IP1-210ENST00000622829 ERICH6Q7L0X2 663 aa26.65■■□□□ 1.86
GTF2IP1-210ENST00000622829 NEFLP07196 543 aa26.65■■□□□ 1.86
GTF2IP1-210ENST00000622829 HIRIP3Q9BW71 556 aaPredicted RBP26.63■■□□□ 1.85
GTF2IP1-210ENST00000622829 CSRNP3Q8WYN3 585 aa26.62■■□□□ 1.85
GTF2IP1-210ENST00000622829 FKBP8Q14318 412 aa26.58■■□□□ 1.84
GTF2IP1-210ENST00000622829 RB1CC1Q8TDY2 1594 aa26.55■■□□□ 1.84
GTF2IP1-210ENST00000622829 SUPT16HQ9Y5B9 1047 aaKnown RBP26.52■■□□□ 1.84
GTF2IP1-210ENST00000622829 TRIM52Q96A61 297 aa26.49■■□□□ 1.83
GTF2IP1-210ENST00000622829 PABPN1Q86U42 306 aaKnown RBP eCLIP26.46■■□□□ 1.83
GTF2IP1-210ENST00000622829 KCNH8Q96L42 1107 aa26.44■■□□□ 1.82
GTF2IP1-210ENST00000622829 DDX10Q13206 875 aaKnown RBP26.43■■□□□ 1.82
GTF2IP1-210ENST00000622829 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
GTF2IP1-210ENST00000622829 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
GTF2IP1-210ENST00000622829 IRX6P78412 446 aaPredicted RBP26.4■■□□□ 1.82
GTF2IP1-210ENST00000622829 SOGA1O94964 1423 aa26.3■■□□□ 1.8
GTF2IP1-210ENST00000622829 TSHZ2Q9NRE2 1034 aa26.28■■□□□ 1.8
GTF2IP1-210ENST00000622829 ANP32EQ9BTT0 268 aa26.27■■□□□ 1.8
GTF2IP1-210ENST00000622829 BCL11AQ9H165 835 aa26.26■■□□□ 1.79
GTF2IP1-210ENST00000622829 FAM50AQ14320 339 aaKnown RBP26.25■■□□□ 1.79
GTF2IP1-210ENST00000622829 SENP3-EIF4A1A0A087X0R7 540 aa26.19■■□□□ 1.78
GTF2IP1-210ENST00000622829 POLR3GLQ9BT43 218 aa26.14■■□□□ 1.77
GTF2IP1-210ENST00000622829 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
GTF2IP1-210ENST00000622829 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
GTF2IP1-210ENST00000622829 P3H3Q8IVL6 736 aa26.12■■□□□ 1.77
GTF2IP1-210ENST00000622829 NACADO15069 1562 aa26.04■■□□□ 1.76
GTF2IP1-210ENST00000622829 RUSC2Q8N2Y8 1516 aa26.03■■□□□ 1.76
GTF2IP1-210ENST00000622829 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
GTF2IP1-210ENST00000622829 SIN3AQ96ST3 1273 aa26■■□□□ 1.75
GTF2IP1-210ENST00000622829 ANP32CO43423 234 aa25.97■■□□□ 1.75
GTF2IP1-210ENST00000622829 CLIP1P30622 1438 aa25.96■■□□□ 1.75
GTF2IP1-210ENST00000622829 NBR1Q14596 966 aa25.93■■□□□ 1.74
GTF2IP1-210ENST00000622829 TNIKQ9UKE5 1360 aa25.93■■□□□ 1.74
GTF2IP1-210ENST00000622829 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
GTF2IP1-210ENST00000622829 RBM19Q9Y4C8 960 aaKnown RBP25.92■■□□□ 1.74
GTF2IP1-210ENST00000622829 KANK4Q5T7N3 995 aaPredicted RBP25.91■■□□□ 1.74
GTF2IP1-210ENST00000622829 CDK11AQ9UQ88 783 aaPredicted RBP25.86■■□□□ 1.73
GTF2IP1-210ENST00000622829 WIZO95785 1651 aa25.78■■□□□ 1.72
GTF2IP1-210ENST00000622829 FAM9BQ8IZU0 186 aa25.75■■□□□ 1.71
GTF2IP1-210ENST00000622829 ARID3CA6NKF2 412 aa25.71■■□□□ 1.71
GTF2IP1-210ENST00000622829 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
GTF2IP1-210ENST00000622829 CLSPNQ9HAW4 1339 aa25.64■■□□□ 1.69
GTF2IP1-210ENST00000622829 NPM2Q86SE8 214 aaKnown RBP25.64■■□□□ 1.69
GTF2IP1-210ENST00000622829 B4GALNT3Q6L9W6 998 aa25.58■■□□□ 1.69
GTF2IP1-210ENST00000622829 ZNF326Q5BKZ1 582 aaKnown RBP25.58■■□□□ 1.69
GTF2IP1-210ENST00000622829 RTN4Q9NQC3 1192 aaKnown RBP25.56■■□□□ 1.68
GTF2IP1-210ENST00000622829 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
GTF2IP1-210ENST00000622829 DHX57Q6P158 1386 aaKnown RBP25.55■■□□□ 1.68
GTF2IP1-210ENST00000622829 SALL2Q9Y467 1007 aaPredicted RBP25.55■■□□□ 1.68
GTF2IP1-210ENST00000622829 RTL5Q5HYW3 569 aaPredicted RBP25.49■■□□□ 1.67
GTF2IP1-210ENST00000622829 CHIC2Q9UKJ5 165 aa25.49■■□□□ 1.67
GTF2IP1-210ENST00000622829 VPS8Q8N3P4 1428 aa25.42■■□□□ 1.66
GTF2IP1-210ENST00000622829 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
GTF2IP1-210ENST00000622829 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
GTF2IP1-210ENST00000622829 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
GTF2IP1-210ENST00000622829 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
GTF2IP1-210ENST00000622829 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
GTF2IP1-210ENST00000622829 DEKP35659 375 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms