RNA–Protein interactions for RNA: ENST00000254323.6

ZSWIM4-201, Transcript of zinc finger SWIM-type containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZSWIM4, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4-201ENST00000254323 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
ZSWIM4-201ENST00000254323 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
ZSWIM4-201ENST00000254323 SHROOM4Q9ULL8 1493 aa31.68■■■□□ 2.66
ZSWIM4-201ENST00000254323 SUPT5HO00267 1087 aaKnown RBP31.59■■■□□ 2.65
ZSWIM4-201ENST00000254323 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
ZSWIM4-201ENST00000254323 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
ZSWIM4-201ENST00000254323 FAM9AQ8IZU1 332 aaPredicted RBP29.61■■■□□ 2.33
ZSWIM4-201ENST00000254323 PELP1Q8IZL8 1130 aaKnown RBP29.48■■■□□ 2.31
ZSWIM4-201ENST00000254323 HRCP23327 699 aa29.24■■■□□ 2.27
ZSWIM4-201ENST00000254323 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
ZSWIM4-201ENST00000254323 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
ZSWIM4-201ENST00000254323 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
ZSWIM4-201ENST00000254323 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
ZSWIM4-201ENST00000254323 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
ZSWIM4-201ENST00000254323 MYT1Q01538 1121 aa28.67■■■□□ 2.18
ZSWIM4-201ENST00000254323 ABCC9O60706 1549 aa28.62■■■□□ 2.17
ZSWIM4-201ENST00000254323 RANGAP1P46060 587 aaPredicted RBP28.59■■■□□ 2.17
ZSWIM4-201ENST00000254323 ZCCHC6Q5VYS8 1495 aaKnown RBP28.49■■■□□ 2.15
ZSWIM4-201ENST00000254323 UBTFP17480 764 aaKnown RBP28.33■■■□□ 2.13
ZSWIM4-201ENST00000254323 CENPBP07199 599 aaPredicted RBP28.32■■■□□ 2.12
ZSWIM4-201ENST00000254323 APLP2Q06481 763 aa28.3■■■□□ 2.12
ZSWIM4-201ENST00000254323 ZEB1P37275 1124 aaPredicted RBP28.29■■■□□ 2.12
ZSWIM4-201ENST00000254323 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
ZSWIM4-201ENST00000254323 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
ZSWIM4-201ENST00000254323 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
ZSWIM4-201ENST00000254323 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
ZSWIM4-201ENST00000254323 YTHDC1Q96MU7 727 aaKnown RBP27.99■■■□□ 2.07
ZSWIM4-201ENST00000254323 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
ZSWIM4-201ENST00000254323 ATP1B4Q9UN42 357 aaPredicted RBP27.77■■■□□ 2.04
ZSWIM4-201ENST00000254323 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
ZSWIM4-201ENST00000254323 GTF3C3Q9Y5Q9 886 aa27.68■■■□□ 2.02
ZSWIM4-201ENST00000254323 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
ZSWIM4-201ENST00000254323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.6■■■□□ 2.01
ZSWIM4-201ENST00000254323 HNRNPUL2Q1KMD3 747 aaKnown RBP27.53■■■□□ 2
ZSWIM4-201ENST00000254323 ACIN1Q9UKV3 1341 aaKnown RBP27.41■■□□□ 1.98
ZSWIM4-201ENST00000254323 ITGAEP38570 1179 aa27.4■■□□□ 1.98
ZSWIM4-201ENST00000254323 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
ZSWIM4-201ENST00000254323 DIEXFQ68CQ4 756 aaKnown RBP27.34■■□□□ 1.97
ZSWIM4-201ENST00000254323 NEUROD1Q13562 356 aa27.2■■□□□ 1.94
ZSWIM4-201ENST00000254323 ERICH6Q7L0X2 663 aa27.18■■□□□ 1.94
ZSWIM4-201ENST00000254323 CSRNP3Q8WYN3 585 aa27.17■■□□□ 1.94
ZSWIM4-201ENST00000254323 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
ZSWIM4-201ENST00000254323 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
ZSWIM4-201ENST00000254323 NACADO15069 1562 aa26.85■■□□□ 1.89
ZSWIM4-201ENST00000254323 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
ZSWIM4-201ENST00000254323 NEFLP07196 543 aa26.76■■□□□ 1.87
ZSWIM4-201ENST00000254323 P3H3Q8IVL6 736 aa26.75■■□□□ 1.87
ZSWIM4-201ENST00000254323 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
ZSWIM4-201ENST00000254323 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.87
ZSWIM4-201ENST00000254323 BCANQ96GW7 911 aa26.62■■□□□ 1.85
ZSWIM4-201ENST00000254323 ZNF316A6NFI3 1004 aaPredicted RBP26.49■■□□□ 1.83
ZSWIM4-201ENST00000254323 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
ZSWIM4-201ENST00000254323 ARID3CA6NKF2 412 aa26.44■■□□□ 1.82
ZSWIM4-201ENST00000254323 CEP162Q5TB80 1403 aa26.42■■□□□ 1.82
ZSWIM4-201ENST00000254323 CNGB1Q14028 1251 aaPredicted RBP26.41■■□□□ 1.82
ZSWIM4-201ENST00000254323 SOGA1O94964 1423 aa26.4■■□□□ 1.82
ZSWIM4-201ENST00000254323 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
ZSWIM4-201ENST00000254323 WIZO95785 1651 aa26.36■■□□□ 1.81
ZSWIM4-201ENST00000254323 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
ZSWIM4-201ENST00000254323 POLR3GLQ9BT43 218 aa26.32■■□□□ 1.8
ZSWIM4-201ENST00000254323 CLIP1P30622 1438 aa26.31■■□□□ 1.8
ZSWIM4-201ENST00000254323 CCDC88BA6NC98 1476 aa26.31■■□□□ 1.8
ZSWIM4-201ENST00000254323 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
ZSWIM4-201ENST00000254323 FBLN2P98095 1184 aa26.24■■□□□ 1.79
ZSWIM4-201ENST00000254323 BCL11AQ9H165 835 aa26.23■■□□□ 1.79
ZSWIM4-201ENST00000254323 TRIM52Q96A61 297 aa26.22■■□□□ 1.79
ZSWIM4-201ENST00000254323 GOLGA3Q08378 1498 aa26.18■■□□□ 1.78
ZSWIM4-201ENST00000254323 TNIKQ9UKE5 1360 aa26.18■■□□□ 1.78
ZSWIM4-201ENST00000254323 MIER1Q8N108 512 aa26.18■■□□□ 1.78
ZSWIM4-201ENST00000254323 EEA1Q15075 1411 aa26.13■■□□□ 1.77
ZSWIM4-201ENST00000254323 ANP32EQ9BTT0 268 aa26.12■■□□□ 1.77
ZSWIM4-201ENST00000254323 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
ZSWIM4-201ENST00000254323 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
ZSWIM4-201ENST00000254323 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
ZSWIM4-201ENST00000254323 FKBP8Q14318 412 aa25.93■■□□□ 1.74
ZSWIM4-201ENST00000254323 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
ZSWIM4-201ENST00000254323 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
ZSWIM4-201ENST00000254323 CHIC2Q9UKJ5 165 aa25.88■■□□□ 1.73
ZSWIM4-201ENST00000254323 RTL5Q5HYW3 569 aaPredicted RBP25.87■■□□□ 1.73
ZSWIM4-201ENST00000254323 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
ZSWIM4-201ENST00000254323 HIRIP3Q9BW71 556 aaPredicted RBP25.85■■□□□ 1.73
ZSWIM4-201ENST00000254323 ZNF777Q9ULD5 760 aaPredicted RBP25.84■■□□□ 1.73
ZSWIM4-201ENST00000254323 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
ZSWIM4-201ENST00000254323 DDX10Q13206 875 aaKnown RBP25.79■■□□□ 1.72
ZSWIM4-201ENST00000254323 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
ZSWIM4-201ENST00000254323 KANK4Q5T7N3 995 aaPredicted RBP25.76■■□□□ 1.71
ZSWIM4-201ENST00000254323 ANP32CO43423 234 aa25.74■■□□□ 1.71
ZSWIM4-201ENST00000254323 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
ZSWIM4-201ENST00000254323 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
ZSWIM4-201ENST00000254323 SUPT16HQ9Y5B9 1047 aaKnown RBP25.7■■□□□ 1.7
ZSWIM4-201ENST00000254323 MTUS2Q5JR59 1369 aa25.68■■□□□ 1.7
ZSWIM4-201ENST00000254323 CUX2O14529 1486 aa25.66■■□□□ 1.7
ZSWIM4-201ENST00000254323 VPS8Q8N3P4 1428 aa25.62■■□□□ 1.69
ZSWIM4-201ENST00000254323 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
ZSWIM4-201ENST00000254323 TONSLQ96HA7 1378 aa25.62■■□□□ 1.69
ZSWIM4-201ENST00000254323 RRP7BPQ9NSQ0 103 aa25.61■■□□□ 1.69
ZSWIM4-201ENST00000254323 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
ZSWIM4-201ENST00000254323 CARMIL1Q5VZK9 1371 aa25.59■■□□□ 1.69
ZSWIM4-201ENST00000254323 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.68
ZSWIM4-201ENST00000254323 NBR1Q14596 966 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms