RNA–Protein interactions for RNA: ENST00000306317.6

LGI3-201, Transcript of leucine rich repeat LGI family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGI3, Length 3,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3-201ENST00000306317 NISCHQ9Y2I1 1504 aa35.86■■■■□ 3.33
LGI3-201ENST00000306317 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
LGI3-201ENST00000306317 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
LGI3-201ENST00000306317 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
LGI3-201ENST00000306317 PCGF6Q9BYE7 350 aa30.98■■■□□ 2.55
LGI3-201ENST00000306317 PPARGC1BQ86YN6 1023 aaKnown RBP30.81■■■□□ 2.52
LGI3-201ENST00000306317 HRCP23327 699 aa30.58■■■□□ 2.49
LGI3-201ENST00000306317 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
LGI3-201ENST00000306317 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
LGI3-201ENST00000306317 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
LGI3-201ENST00000306317 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
LGI3-201ENST00000306317 LOC105371045A0A1W2PR82 267 aa30.2■■■□□ 2.42
LGI3-201ENST00000306317 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
LGI3-201ENST00000306317 FAM9AQ8IZU1 332 aaPredicted RBP29.78■■■□□ 2.36
LGI3-201ENST00000306317 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
LGI3-201ENST00000306317 TRIM26Q12899 539 aaPredicted RBP29.33■■■□□ 2.29
LGI3-201ENST00000306317 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
LGI3-201ENST00000306317 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
LGI3-201ENST00000306317 SCAF1Q9H7N4 1312 aaKnown RBP28.98■■■□□ 2.23
LGI3-201ENST00000306317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.85■■■□□ 2.21
LGI3-201ENST00000306317 CCER1Q8TC90 406 aaPredicted RBP28.76■■■□□ 2.19
LGI3-201ENST00000306317 ZEB1P37275 1124 aaPredicted RBP28.74■■■□□ 2.19
LGI3-201ENST00000306317 YTHDC1Q96MU7 727 aaKnown RBP28.65■■■□□ 2.18
LGI3-201ENST00000306317 PELP1Q8IZL8 1130 aaKnown RBP28.63■■■□□ 2.17
LGI3-201ENST00000306317 SCRIBQ14160 1630 aa28.63■■■□□ 2.17
LGI3-201ENST00000306317 ABCC9O60706 1549 aa28.59■■■□□ 2.17
LGI3-201ENST00000306317 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
LGI3-201ENST00000306317 NEUROD1Q13562 356 aa28.48■■■□□ 2.15
LGI3-201ENST00000306317 GTF3C3Q9Y5Q9 886 aa28.46■■■□□ 2.15
LGI3-201ENST00000306317 DIEXFQ68CQ4 756 aaKnown RBP28.3■■■□□ 2.12
LGI3-201ENST00000306317 ACIN1Q9UKV3 1341 aaKnown RBP28.28■■■□□ 2.12
LGI3-201ENST00000306317 CENPBP07199 599 aaPredicted RBP28.21■■■□□ 2.11
LGI3-201ENST00000306317 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.1
LGI3-201ENST00000306317 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
LGI3-201ENST00000306317 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
LGI3-201ENST00000306317 NACADO15069 1562 aa28.05■■■□□ 2.08
LGI3-201ENST00000306317 HNRNPUL2Q1KMD3 747 aaKnown RBP27.94■■■□□ 2.06
LGI3-201ENST00000306317 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
LGI3-201ENST00000306317 UBTFP17480 764 aaKnown RBP27.92■■■□□ 2.06
LGI3-201ENST00000306317 WIZO95785 1651 aa27.77■■■□□ 2.04
LGI3-201ENST00000306317 MIER1Q8N108 512 aa27.62■■■□□ 2.01
LGI3-201ENST00000306317 ZNF316A6NFI3 1004 aaPredicted RBP27.57■■■□□ 2
LGI3-201ENST00000306317 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
LGI3-201ENST00000306317 APLP2Q06481 763 aa27.4■■□□□ 1.98
LGI3-201ENST00000306317 ITGAEP38570 1179 aa27.31■■□□□ 1.96
LGI3-201ENST00000306317 BCANQ96GW7 911 aa27.31■■□□□ 1.96
LGI3-201ENST00000306317 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
LGI3-201ENST00000306317 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
LGI3-201ENST00000306317 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
LGI3-201ENST00000306317 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
LGI3-201ENST00000306317 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
LGI3-201ENST00000306317 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
LGI3-201ENST00000306317 MYT1Q01538 1121 aa27.2■■□□□ 1.95
LGI3-201ENST00000306317 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
LGI3-201ENST00000306317 CSRNP3Q8WYN3 585 aa27.12■■□□□ 1.93
LGI3-201ENST00000306317 CEP162Q5TB80 1403 aa27.1■■□□□ 1.93
LGI3-201ENST00000306317 SOGA1O94964 1423 aa27.09■■□□□ 1.93
LGI3-201ENST00000306317 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
LGI3-201ENST00000306317 RUSC2Q8N2Y8 1516 aa26.93■■□□□ 1.9
LGI3-201ENST00000306317 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
LGI3-201ENST00000306317 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
LGI3-201ENST00000306317 EEA1Q15075 1411 aa26.85■■□□□ 1.89
LGI3-201ENST00000306317 SUPT16HQ9Y5B9 1047 aaKnown RBP26.82■■□□□ 1.88
LGI3-201ENST00000306317 KCNH8Q96L42 1107 aa26.82■■□□□ 1.88
LGI3-201ENST00000306317 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
LGI3-201ENST00000306317 HIRIP3Q9BW71 556 aaPredicted RBP26.8■■□□□ 1.88
LGI3-201ENST00000306317 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
LGI3-201ENST00000306317 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
LGI3-201ENST00000306317 FKBP8Q14318 412 aa26.66■■□□□ 1.86
LGI3-201ENST00000306317 TRIM52Q96A61 297 aa26.61■■□□□ 1.85
LGI3-201ENST00000306317 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
LGI3-201ENST00000306317 DDX10Q13206 875 aaKnown RBP26.6■■□□□ 1.85
LGI3-201ENST00000306317 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
LGI3-201ENST00000306317 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
LGI3-201ENST00000306317 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.84
LGI3-201ENST00000306317 TSHZ2Q9NRE2 1034 aa26.57■■□□□ 1.84
LGI3-201ENST00000306317 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
LGI3-201ENST00000306317 CLIP1P30622 1438 aa26.54■■□□□ 1.84
LGI3-201ENST00000306317 CNGB1Q14028 1251 aaPredicted RBP26.51■■□□□ 1.83
LGI3-201ENST00000306317 NEFLP07196 543 aa26.49■■□□□ 1.83
LGI3-201ENST00000306317 KANK4Q5T7N3 995 aaPredicted RBP26.46■■□□□ 1.83
LGI3-201ENST00000306317 IRX6P78412 446 aaPredicted RBP26.45■■□□□ 1.83
LGI3-201ENST00000306317 FAM50AQ14320 339 aaKnown RBP26.41■■□□□ 1.82
LGI3-201ENST00000306317 KIF21BO75037 1637 aa26.4■■□□□ 1.82
LGI3-201ENST00000306317 ANP32EQ9BTT0 268 aa26.4■■□□□ 1.82
LGI3-201ENST00000306317 BCL11AQ9H165 835 aa26.4■■□□□ 1.82
LGI3-201ENST00000306317 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.81
LGI3-201ENST00000306317 P3H3Q8IVL6 736 aa26.36■■□□□ 1.81
LGI3-201ENST00000306317 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
LGI3-201ENST00000306317 SIN3AQ96ST3 1273 aa26.34■■□□□ 1.81
LGI3-201ENST00000306317 ERICH6Q7L0X2 663 aa26.29■■□□□ 1.8
LGI3-201ENST00000306317 SENP3-EIF4A1A0A087X0R7 540 aa26.2■■□□□ 1.78
LGI3-201ENST00000306317 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
LGI3-201ENST00000306317 DHX57Q6P158 1386 aaKnown RBP26.18■■□□□ 1.78
LGI3-201ENST00000306317 RBM19Q9Y4C8 960 aaKnown RBP26.12■■□□□ 1.77
LGI3-201ENST00000306317 ANP32CO43423 234 aa26.08■■□□□ 1.76
LGI3-201ENST00000306317 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
LGI3-201ENST00000306317 PRXQ9BXM0 1461 aa26.03■■□□□ 1.76
LGI3-201ENST00000306317 HNRNPUQ00839 825 aaKnown RBP eCLIP26.02■■□□□ 1.76
LGI3-201ENST00000306317 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms