Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC026471.6-201ENST00000622954 1905 ntBASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 AP004607.4-201ENST00000530158 1459 ntBASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV23-1A0A0A0MS06 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC004854.2-201ENST00000608450 1441 ntBASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AL162430.1-201ENST00000480705 870 ntBASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC138907.5-202ENST00000569484 235 ntBASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV23-1A0A0A0MS06 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 KRT18P5-201ENST00000436075 1291 ntBASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV23-1A0A0A0MS06 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC010141.2-201ENST00000452426 721 ntBASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC104187.1-201ENST00000607510 612 ntBASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC008175.2-201ENST00000612840 297 ntBASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV23-1A0A0A0MS06 AL158211.5-201ENST00000623583 2518 ntBASIC17.46■□□□□ 0.38
TRBV23-1A0A0A0MS06 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRBV23-1A0A0A0MS06 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRBV23-1A0A0A0MS06 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRBV23-1A0A0A0MS06 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 389.2 ms