RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
PRDM1-202ENST00000369091 HRCP23327 699 aa31.95■■■□□ 2.71
PRDM1-202ENST00000369091 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
PRDM1-202ENST00000369091 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
PRDM1-202ENST00000369091 PCGF6Q9BYE7 350 aa31.26■■■□□ 2.59
PRDM1-202ENST00000369091 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
PRDM1-202ENST00000369091 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
PRDM1-202ENST00000369091 PELP1Q8IZL8 1130 aaKnown RBP30.96■■■□□ 2.55
PRDM1-202ENST00000369091 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
PRDM1-202ENST00000369091 SCAF1Q9H7N4 1312 aaKnown RBP30.43■■■□□ 2.46
PRDM1-202ENST00000369091 DCAF1Q9Y4B6 1507 aa30.3■■■□□ 2.44
PRDM1-202ENST00000369091 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
PRDM1-202ENST00000369091 TRIM26Q12899 539 aaPredicted RBP30.08■■■□□ 2.41
PRDM1-202ENST00000369091 CCDC180Q9P1Z9 1646 aa29.99■■■□□ 2.39
PRDM1-202ENST00000369091 ZEB1P37275 1124 aaPredicted RBP29.81■■■□□ 2.36
PRDM1-202ENST00000369091 MYT1Q01538 1121 aa29.73■■■□□ 2.35
PRDM1-202ENST00000369091 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.34
PRDM1-202ENST00000369091 ACIN1Q9UKV3 1341 aaKnown RBP29.53■■■□□ 2.32
PRDM1-202ENST00000369091 NEUROD1Q13562 356 aa29.51■■■□□ 2.31
PRDM1-202ENST00000369091 GTF3C3Q9Y5Q9 886 aa29.35■■■□□ 2.29
PRDM1-202ENST00000369091 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
PRDM1-202ENST00000369091 CENPBP07199 599 aaPredicted RBP29.05■■■□□ 2.24
PRDM1-202ENST00000369091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.91■■■□□ 2.22
PRDM1-202ENST00000369091 DIEXFQ68CQ4 756 aaKnown RBP28.91■■■□□ 2.22
PRDM1-202ENST00000369091 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
PRDM1-202ENST00000369091 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
PRDM1-202ENST00000369091 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
PRDM1-202ENST00000369091 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
PRDM1-202ENST00000369091 YTHDC1Q96MU7 727 aaKnown RBP28.59■■■□□ 2.17
PRDM1-202ENST00000369091 ABCC9O60706 1549 aa28.29■■■□□ 2.12
PRDM1-202ENST00000369091 ZNF316A6NFI3 1004 aaPredicted RBP28.27■■■□□ 2.12
PRDM1-202ENST00000369091 TTBK1Q5TCY1 1321 aaPredicted RBP28.24■■■□□ 2.11
PRDM1-202ENST00000369091 MIER1Q8N108 512 aa28.21■■■□□ 2.11
PRDM1-202ENST00000369091 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
PRDM1-202ENST00000369091 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
PRDM1-202ENST00000369091 BCL11AQ9H165 835 aa28.08■■■□□ 2.09
PRDM1-202ENST00000369091 ANP32EQ9BTT0 268 aa27.93■■■□□ 2.06
PRDM1-202ENST00000369091 SUPT16HQ9Y5B9 1047 aaKnown RBP27.87■■■□□ 2.05
PRDM1-202ENST00000369091 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
PRDM1-202ENST00000369091 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
PRDM1-202ENST00000369091 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
PRDM1-202ENST00000369091 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
PRDM1-202ENST00000369091 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
PRDM1-202ENST00000369091 CLSPNQ9HAW4 1339 aa27.58■■■□□ 2.01
PRDM1-202ENST00000369091 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
PRDM1-202ENST00000369091 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
PRDM1-202ENST00000369091 BCANQ96GW7 911 aa27.35■■□□□ 1.97
PRDM1-202ENST00000369091 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
PRDM1-202ENST00000369091 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
PRDM1-202ENST00000369091 CCDC88BA6NC98 1476 aa27.29■■□□□ 1.96
PRDM1-202ENST00000369091 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
PRDM1-202ENST00000369091 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
PRDM1-202ENST00000369091 WIZO95785 1651 aa27.27■■□□□ 1.96
PRDM1-202ENST00000369091 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
PRDM1-202ENST00000369091 SOGA1O94964 1423 aa27.23■■□□□ 1.95
PRDM1-202ENST00000369091 KCNH8Q96L42 1107 aa27.14■■□□□ 1.94
PRDM1-202ENST00000369091 RBM19Q9Y4C8 960 aaKnown RBP27.12■■□□□ 1.93
PRDM1-202ENST00000369091 FKBP8Q14318 412 aa27.1■■□□□ 1.93
PRDM1-202ENST00000369091 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
PRDM1-202ENST00000369091 PRKCSHP14314 528 aaPredicted RBP27.03■■□□□ 1.92
PRDM1-202ENST00000369091 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
PRDM1-202ENST00000369091 MSH5O43196 834 aa26.97■■□□□ 1.91
PRDM1-202ENST00000369091 GOLGA3Q08378 1498 aa26.95■■□□□ 1.91
PRDM1-202ENST00000369091 DHX57Q6P158 1386 aaKnown RBP26.95■■□□□ 1.9
PRDM1-202ENST00000369091 ITGAEP38570 1179 aa26.93■■□□□ 1.9
PRDM1-202ENST00000369091 NACADO15069 1562 aa26.91■■□□□ 1.9
PRDM1-202ENST00000369091 EEA1Q15075 1411 aa26.86■■□□□ 1.89
PRDM1-202ENST00000369091 CLIP1P30622 1438 aa26.8■■□□□ 1.88
PRDM1-202ENST00000369091 APLP2Q06481 763 aa26.79■■□□□ 1.88
PRDM1-202ENST00000369091 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
PRDM1-202ENST00000369091 NEFLP07196 543 aa26.76■■□□□ 1.87
PRDM1-202ENST00000369091 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
PRDM1-202ENST00000369091 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.86
PRDM1-202ENST00000369091 ERICH6Q7L0X2 663 aa26.63■■□□□ 1.85
PRDM1-202ENST00000369091 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
PRDM1-202ENST00000369091 TRIM52Q96A61 297 aa26.63■■□□□ 1.85
PRDM1-202ENST00000369091 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
PRDM1-202ENST00000369091 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
PRDM1-202ENST00000369091 DDX10Q13206 875 aaKnown RBP26.6■■□□□ 1.85
PRDM1-202ENST00000369091 FANCIQ9NVI1 1328 aa26.57■■□□□ 1.84
PRDM1-202ENST00000369091 KIF21BO75037 1637 aa26.53■■□□□ 1.84
PRDM1-202ENST00000369091 DEKP35659 375 aaKnown RBP26.5■■□□□ 1.83
PRDM1-202ENST00000369091 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
PRDM1-202ENST00000369091 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
PRDM1-202ENST00000369091 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
PRDM1-202ENST00000369091 IRX6P78412 446 aaPredicted RBP26.43■■□□□ 1.82
PRDM1-202ENST00000369091 CDK11AQ9UQ88 783 aaPredicted RBP26.4■■□□□ 1.82
PRDM1-202ENST00000369091 ANO8Q9HCE9 1232 aaPredicted RBP26.38■■□□□ 1.81
PRDM1-202ENST00000369091 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
PRDM1-202ENST00000369091 HIRIP3Q9BW71 556 aaPredicted RBP26.36■■□□□ 1.81
PRDM1-202ENST00000369091 BAZ1BQ9UIG0 1483 aaKnown RBP26.35■■□□□ 1.81
PRDM1-202ENST00000369091 SYNJ1O43426 1573 aa26.32■■□□□ 1.8
PRDM1-202ENST00000369091 MAPKBP1O60336 1514 aa26.31■■□□□ 1.8
PRDM1-202ENST00000369091 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
PRDM1-202ENST00000369091 CUX2O14529 1486 aa26.3■■□□□ 1.8
PRDM1-202ENST00000369091 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
PRDM1-202ENST00000369091 MYT1LQ9UL68 1186 aa26.29■■□□□ 1.8
PRDM1-202ENST00000369091 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
PRDM1-202ENST00000369091 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
PRDM1-202ENST00000369091 ANP32CO43423 234 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms