RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
PRDM1-202ENST00000369091 HRCP23327 699 aa31.95■■■□□ 2.71
PRDM1-202ENST00000369091 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
PRDM1-202ENST00000369091 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
PRDM1-202ENST00000369091 PCGF6Q9BYE7 350 aa31.26■■■□□ 2.59
PRDM1-202ENST00000369091 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
PRDM1-202ENST00000369091 MYO15BQ96JP2 1530 aa31.09■■■□□ 2.57
PRDM1-202ENST00000369091 PELP1Q8IZL8 1130 aaKnown RBP30.96■■■□□ 2.55
PRDM1-202ENST00000369091 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
PRDM1-202ENST00000369091 SCAF1Q9H7N4 1312 aaKnown RBP30.43■■■□□ 2.46
PRDM1-202ENST00000369091 DCAF1Q9Y4B6 1507 aa30.3■■■□□ 2.44
PRDM1-202ENST00000369091 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
PRDM1-202ENST00000369091 TRIM26Q12899 539 aaPredicted RBP30.08■■■□□ 2.41
PRDM1-202ENST00000369091 CCDC180Q9P1Z9 1646 aa29.99■■■□□ 2.39
PRDM1-202ENST00000369091 ZEB1P37275 1124 aaPredicted RBP29.81■■■□□ 2.36
PRDM1-202ENST00000369091 MYT1Q01538 1121 aa29.73■■■□□ 2.35
PRDM1-202ENST00000369091 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.34
PRDM1-202ENST00000369091 ACIN1Q9UKV3 1341 aaKnown RBP29.53■■■□□ 2.32
PRDM1-202ENST00000369091 NEUROD1Q13562 356 aa29.51■■■□□ 2.31
PRDM1-202ENST00000369091 GTF3C3Q9Y5Q9 886 aa29.35■■■□□ 2.29
PRDM1-202ENST00000369091 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
PRDM1-202ENST00000369091 CENPBP07199 599 aaPredicted RBP29.05■■■□□ 2.24
PRDM1-202ENST00000369091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.91■■■□□ 2.22
PRDM1-202ENST00000369091 DIEXFQ68CQ4 756 aaKnown RBP28.91■■■□□ 2.22
PRDM1-202ENST00000369091 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
PRDM1-202ENST00000369091 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
PRDM1-202ENST00000369091 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
PRDM1-202ENST00000369091 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
PRDM1-202ENST00000369091 YTHDC1Q96MU7 727 aaKnown RBP28.59■■■□□ 2.17
PRDM1-202ENST00000369091 ABCC9O60706 1549 aa28.29■■■□□ 2.12
PRDM1-202ENST00000369091 ZNF316A6NFI3 1004 aaPredicted RBP28.27■■■□□ 2.12
PRDM1-202ENST00000369091 TTBK1Q5TCY1 1321 aaPredicted RBP28.24■■■□□ 2.11
PRDM1-202ENST00000369091 MIER1Q8N108 512 aa28.21■■■□□ 2.11
PRDM1-202ENST00000369091 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
PRDM1-202ENST00000369091 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
PRDM1-202ENST00000369091 BCL11AQ9H165 835 aa28.08■■■□□ 2.09
PRDM1-202ENST00000369091 ANP32EQ9BTT0 268 aa27.93■■■□□ 2.06
PRDM1-202ENST00000369091 SUPT16HQ9Y5B9 1047 aaKnown RBP27.87■■■□□ 2.05
PRDM1-202ENST00000369091 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
PRDM1-202ENST00000369091 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
PRDM1-202ENST00000369091 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
PRDM1-202ENST00000369091 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
PRDM1-202ENST00000369091 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
PRDM1-202ENST00000369091 CLSPNQ9HAW4 1339 aa27.58■■■□□ 2.01
PRDM1-202ENST00000369091 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
PRDM1-202ENST00000369091 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
PRDM1-202ENST00000369091 BCANQ96GW7 911 aa27.35■■□□□ 1.97
PRDM1-202ENST00000369091 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
PRDM1-202ENST00000369091 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
PRDM1-202ENST00000369091 CCDC88BA6NC98 1476 aa27.29■■□□□ 1.96
PRDM1-202ENST00000369091 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
PRDM1-202ENST00000369091 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
PRDM1-202ENST00000369091 WIZO95785 1651 aa27.27■■□□□ 1.96
PRDM1-202ENST00000369091 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
PRDM1-202ENST00000369091 SOGA1O94964 1423 aa27.23■■□□□ 1.95
PRDM1-202ENST00000369091 KCNH8Q96L42 1107 aa27.14■■□□□ 1.94
PRDM1-202ENST00000369091 RBM19Q9Y4C8 960 aaKnown RBP27.12■■□□□ 1.93
PRDM1-202ENST00000369091 FKBP8Q14318 412 aa27.1■■□□□ 1.93
PRDM1-202ENST00000369091 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
PRDM1-202ENST00000369091 PRKCSHP14314 528 aaPredicted RBP27.03■■□□□ 1.92
PRDM1-202ENST00000369091 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
PRDM1-202ENST00000369091 MSH5O43196 834 aa26.97■■□□□ 1.91
PRDM1-202ENST00000369091 GOLGA3Q08378 1498 aa26.95■■□□□ 1.91
PRDM1-202ENST00000369091 DHX57Q6P158 1386 aaKnown RBP26.95■■□□□ 1.9
PRDM1-202ENST00000369091 ITGAEP38570 1179 aa26.93■■□□□ 1.9
PRDM1-202ENST00000369091 NACADO15069 1562 aa26.91■■□□□ 1.9
PRDM1-202ENST00000369091 EEA1Q15075 1411 aa26.86■■□□□ 1.89
PRDM1-202ENST00000369091 CLIP1P30622 1438 aa26.8■■□□□ 1.88
PRDM1-202ENST00000369091 APLP2Q06481 763 aa26.79■■□□□ 1.88
PRDM1-202ENST00000369091 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
PRDM1-202ENST00000369091 NEFLP07196 543 aa26.76■■□□□ 1.87
PRDM1-202ENST00000369091 RANGAP1P46060 587 aaPredicted RBP26.73■■□□□ 1.87
PRDM1-202ENST00000369091 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.86
PRDM1-202ENST00000369091 ERICH6Q7L0X2 663 aa26.63■■□□□ 1.85
PRDM1-202ENST00000369091 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
PRDM1-202ENST00000369091 TRIM52Q96A61 297 aa26.63■■□□□ 1.85
PRDM1-202ENST00000369091 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
PRDM1-202ENST00000369091 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
PRDM1-202ENST00000369091 DDX10Q13206 875 aaKnown RBP26.6■■□□□ 1.85
PRDM1-202ENST00000369091 FANCIQ9NVI1 1328 aa26.57■■□□□ 1.84
PRDM1-202ENST00000369091 KIF21BO75037 1637 aa26.53■■□□□ 1.84
PRDM1-202ENST00000369091 DEKP35659 375 aaKnown RBP26.5■■□□□ 1.83
PRDM1-202ENST00000369091 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
PRDM1-202ENST00000369091 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
PRDM1-202ENST00000369091 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
PRDM1-202ENST00000369091 IRX6P78412 446 aaPredicted RBP26.43■■□□□ 1.82
PRDM1-202ENST00000369091 CDK11AQ9UQ88 783 aaPredicted RBP26.4■■□□□ 1.82
PRDM1-202ENST00000369091 ANO8Q9HCE9 1232 aaPredicted RBP26.38■■□□□ 1.81
PRDM1-202ENST00000369091 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
PRDM1-202ENST00000369091 HIRIP3Q9BW71 556 aaPredicted RBP26.36■■□□□ 1.81
PRDM1-202ENST00000369091 BAZ1BQ9UIG0 1483 aaKnown RBP26.35■■□□□ 1.81
PRDM1-202ENST00000369091 SYNJ1O43426 1573 aa26.32■■□□□ 1.8
PRDM1-202ENST00000369091 MAPKBP1O60336 1514 aa26.31■■□□□ 1.8
PRDM1-202ENST00000369091 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
PRDM1-202ENST00000369091 CUX2O14529 1486 aa26.3■■□□□ 1.8
PRDM1-202ENST00000369091 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
PRDM1-202ENST00000369091 MYT1LQ9UL68 1186 aa26.29■■□□□ 1.8
PRDM1-202ENST00000369091 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
PRDM1-202ENST00000369091 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
PRDM1-202ENST00000369091 ANP32CO43423 234 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms