RNA–Protein interactions for RNA: ENST00000349777.5

SNAP23-202, Transcript of synaptosome associated protein 23, humanhuman

TSL 2 BASIC

Gene SNAP23, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-202ENST00000349777 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
SNAP23-202ENST00000349777 SHROOM4Q9ULL8 1493 aa36.51■■■■□ 3.44
SNAP23-202ENST00000349777 ZCCHC6Q5VYS8 1495 aaKnown RBP35.93■■■■□ 3.34
SNAP23-202ENST00000349777 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
SNAP23-202ENST00000349777 SUPT5HO00267 1087 aaKnown RBP35.88■■■■□ 3.33
SNAP23-202ENST00000349777 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
SNAP23-202ENST00000349777 CHIC1Q5VXU3 224 aa34.88■■■■□ 3.17
SNAP23-202ENST00000349777 MYO15BQ96JP2 1530 aa34.8■■■■□ 3.16
SNAP23-202ENST00000349777 DCAF1Q9Y4B6 1507 aa34.73■■■■□ 3.15
SNAP23-202ENST00000349777 HRCP23327 699 aa34.05■■■■□ 3.04
SNAP23-202ENST00000349777 PCGF6Q9BYE7 350 aa34.02■■■■□ 3.04
SNAP23-202ENST00000349777 LOC105371045A0A1W2PR82 267 aa33.94■■■■□ 3.02
SNAP23-202ENST00000349777 ABCC9O60706 1549 aa33.92■■■■□ 3.02
SNAP23-202ENST00000349777 SCRIBQ14160 1630 aa33.85■■■■□ 3.01
SNAP23-202ENST00000349777 RSF1Q96T23 1441 aaPredicted RBP33.71■■■□□ 2.99
SNAP23-202ENST00000349777 PPARGC1BQ86YN6 1023 aaKnown RBP33.44■■■□□ 2.94
SNAP23-202ENST00000349777 RB1CC1Q8TDY2 1594 aa33.37■■■□□ 2.93
SNAP23-202ENST00000349777 TRIM41Q8WV44 630 aa33.34■■■□□ 2.93
SNAP23-202ENST00000349777 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
SNAP23-202ENST00000349777 NACADO15069 1562 aa33.21■■■□□ 2.91
SNAP23-202ENST00000349777 CECR2Q9BXF3 1484 aa33.2■■■□□ 2.9
SNAP23-202ENST00000349777 FAM9AQ8IZU1 332 aaPredicted RBP33.18■■■□□ 2.9
SNAP23-202ENST00000349777 MROH2BQ7Z745 1585 aa33.07■■■□□ 2.88
SNAP23-202ENST00000349777 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
SNAP23-202ENST00000349777 WIZO95785 1651 aa32.88■■■□□ 2.85
SNAP23-202ENST00000349777 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
SNAP23-202ENST00000349777 ZEB1P37275 1124 aaPredicted RBP32.52■■■□□ 2.8
SNAP23-202ENST00000349777 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
SNAP23-202ENST00000349777 TOP2AP11388 1531 aaKnown RBP32.32■■■□□ 2.76
SNAP23-202ENST00000349777 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
SNAP23-202ENST00000349777 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.75
SNAP23-202ENST00000349777 ABCC8Q09428 1581 aa32.25■■■□□ 2.75
SNAP23-202ENST00000349777 SMARCA2P51531 1590 aa32.17■■■□□ 2.74
SNAP23-202ENST00000349777 UNC13AQ9UPW8 1703 aa32.16■■■□□ 2.74
SNAP23-202ENST00000349777 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.72
SNAP23-202ENST00000349777 SOGA1O94964 1423 aa32■■■□□ 2.71
SNAP23-202ENST00000349777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.99■■■□□ 2.71
SNAP23-202ENST00000349777 TTBK1Q5TCY1 1321 aaPredicted RBP31.93■■■□□ 2.7
SNAP23-202ENST00000349777 CEP162Q5TB80 1403 aa31.9■■■□□ 2.7
SNAP23-202ENST00000349777 CCER1Q8TC90 406 aaPredicted RBP31.88■■■□□ 2.69
SNAP23-202ENST00000349777 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
SNAP23-202ENST00000349777 WRNQ14191 1432 aaPredicted RBP eCLIP31.82■■■□□ 2.68
SNAP23-202ENST00000349777 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
SNAP23-202ENST00000349777 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
SNAP23-202ENST00000349777 TNIKQ9UKE5 1360 aa31.79■■■□□ 2.68
SNAP23-202ENST00000349777 UBTFP17480 764 aaKnown RBP31.76■■■□□ 2.68
SNAP23-202ENST00000349777 EEA1Q15075 1411 aa31.73■■■□□ 2.67
SNAP23-202ENST00000349777 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
SNAP23-202ENST00000349777 GOLGA3Q08378 1498 aa31.58■■■□□ 2.65
SNAP23-202ENST00000349777 SCAF1Q9H7N4 1312 aaKnown RBP31.5■■■□□ 2.63
SNAP23-202ENST00000349777 SYNJ1O43426 1573 aa31.49■■■□□ 2.63
SNAP23-202ENST00000349777 ATAD2BQ9ULI0 1458 aa31.46■■■□□ 2.63
SNAP23-202ENST00000349777 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
SNAP23-202ENST00000349777 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
SNAP23-202ENST00000349777 DIEXFQ68CQ4 756 aaKnown RBP31.31■■■□□ 2.6
SNAP23-202ENST00000349777 KIF21BO75037 1637 aa31.28■■■□□ 2.6
SNAP23-202ENST00000349777 CLIP1P30622 1438 aa31.27■■■□□ 2.6
SNAP23-202ENST00000349777 RANGAP1P46060 587 aaPredicted RBP31.2■■■□□ 2.59
SNAP23-202ENST00000349777 RAPGEF2Q9Y4G8 1499 aa31.19■■■□□ 2.58
SNAP23-202ENST00000349777 HNRNPUL2Q1KMD3 747 aaKnown RBP31.19■■■□□ 2.58
SNAP23-202ENST00000349777 PELP1Q8IZL8 1130 aaKnown RBP31.14■■■□□ 2.57
SNAP23-202ENST00000349777 ACIN1Q9UKV3 1341 aaKnown RBP31.13■■■□□ 2.57
SNAP23-202ENST00000349777 VPS8Q8N3P4 1428 aa31.12■■■□□ 2.57
SNAP23-202ENST00000349777 NEUROD1Q13562 356 aa31.12■■■□□ 2.57
SNAP23-202ENST00000349777 APLP2Q06481 763 aa31.05■■■□□ 2.56
SNAP23-202ENST00000349777 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
SNAP23-202ENST00000349777 ZNF316A6NFI3 1004 aaPredicted RBP31.02■■■□□ 2.56
SNAP23-202ENST00000349777 CENPBP07199 599 aaPredicted RBP30.9■■■□□ 2.54
SNAP23-202ENST00000349777 BIVM-ERCC5R4GMW8 1640 aa30.88■■■□□ 2.53
SNAP23-202ENST00000349777 GTF3C3Q9Y5Q9 886 aa30.81■■■□□ 2.52
SNAP23-202ENST00000349777 PRXQ9BXM0 1461 aa30.81■■■□□ 2.52
SNAP23-202ENST00000349777 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
SNAP23-202ENST00000349777 CUX1P39880 1505 aa30.76■■■□□ 2.51
SNAP23-202ENST00000349777 ERICH3Q5RHP9 1530 aa30.76■■■□□ 2.51
SNAP23-202ENST00000349777 HMGXB3Q12766 1538 aa30.74■■■□□ 2.51
SNAP23-202ENST00000349777 ARAP1Q96P48 1450 aa30.73■■■□□ 2.51
SNAP23-202ENST00000349777 KANK4Q5T7N3 995 aaPredicted RBP30.68■■■□□ 2.5
SNAP23-202ENST00000349777 YTHDC1Q96MU7 727 aaKnown RBP30.67■■■□□ 2.5
SNAP23-202ENST00000349777 KIF27Q86VH2 1401 aa30.65■■■□□ 2.5
SNAP23-202ENST00000349777 MIER1Q8N108 512 aa30.65■■■□□ 2.5
SNAP23-202ENST00000349777 CFTRP13569 1480 aa30.6■■■□□ 2.49
SNAP23-202ENST00000349777 DHX57Q6P158 1386 aaKnown RBP30.51■■■□□ 2.47
SNAP23-202ENST00000349777 ARHGAP35Q9NRY4 1499 aa30.45■■■□□ 2.46
SNAP23-202ENST00000349777 CLSPNQ9HAW4 1339 aa30.41■■■□□ 2.46
SNAP23-202ENST00000349777 RRBP1Q9P2E9 1410 aaKnown RBP30.4■■■□□ 2.46
SNAP23-202ENST00000349777 CUX2O14529 1486 aa30.37■■■□□ 2.45
SNAP23-202ENST00000349777 IGF1RP08069 1367 aa30.34■■■□□ 2.45
SNAP23-202ENST00000349777 ITGAEP38570 1179 aa30.34■■■□□ 2.45
SNAP23-202ENST00000349777 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
SNAP23-202ENST00000349777 CADPSQ9ULU8 1353 aa30.26■■■□□ 2.43
SNAP23-202ENST00000349777 CARMIL1Q5VZK9 1371 aa30.21■■■□□ 2.43
SNAP23-202ENST00000349777 PRDM2Q13029 1718 aa30.21■■■□□ 2.43
SNAP23-202ENST00000349777 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
SNAP23-202ENST00000349777 TIAM1Q13009 1591 aa30.1■■■□□ 2.41
SNAP23-202ENST00000349777 RAB3GAP2Q9H2M9 1393 aa30.08■■■□□ 2.41
SNAP23-202ENST00000349777 P3H3Q8IVL6 736 aa30.07■■■□□ 2.4
SNAP23-202ENST00000349777 LRRC9Q6ZRR7 1453 aa30.02■■■□□ 2.4
SNAP23-202ENST00000349777 MAP3K1Q13233 1512 aa30.01■■■□□ 2.39
SNAP23-202ENST00000349777 PHLDB1Q86UU1 1377 aa30■■■□□ 2.39
SNAP23-202ENST00000349777 ATP1B4Q9UN42 357 aaPredicted RBP30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms