Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 KRT87P-202ENST00000534226 1464 ntBASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRGV1A0A0A0MS02 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRGV1A0A0A0MS02 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV1A0A0A0MS02 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.05■□□□□ 0
TRGV1A0A0A0MS02 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRGV1A0A0A0MS02 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
TRGV1A0A0A0MS02 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
TRGV1A0A0A0MS02 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 ZNRF2P3-201ENST00000424200 374 ntBASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 AC053503.5-201ENST00000601508 636 ntBASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRGV1A0A0A0MS02 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 AL049796.1-201ENST00000565336 1766 ntBASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 YBX1P1-201ENST00000445822 960 ntBASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.04■□□□□ -0
TRGV1A0A0A0MS02 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 EEF1DP3-203ENST00000566025 782 ntBASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 AC008175.2-201ENST00000612840 297 ntBASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.03■□□□□ -0
TRGV1A0A0A0MS02 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms