Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCSO14618 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSO14618 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.39■□□□□ 0.37
CCSO14618 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.39■□□□□ 0.37
CCSO14618 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.39■□□□□ 0.37
CCSO14618 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCSO14618 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSO14618 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCSO14618 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CCSO14618 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CCSO14618 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCSO14618 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.38■□□□□ 0.37
CCSO14618 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.38■□□□□ 0.37
CCSO14618 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.38■□□□□ 0.37
CCSO14618 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCSO14618 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.38■□□□□ 0.37
CCSO14618 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.38■□□□□ 0.37
CCSO14618 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCSO14618 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.38■□□□□ 0.37
CCSO14618 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.38■□□□□ 0.37
CCSO14618 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.38■□□□□ 0.37
CCSO14618 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCSO14618 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CCSO14618 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCSO14618 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 AC020907.5-201ENST00000624372 1936 ntBASIC17.37■□□□□ 0.37
CCSO14618 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 AC009102.2-201ENST00000606772 1639 ntBASIC17.37■□□□□ 0.37
CCSO14618 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.37■□□□□ 0.37
CCSO14618 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCSO14618 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCSO14618 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCSO14618 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.36■□□□□ 0.37
CCSO14618 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.36■□□□□ 0.37
CCSO14618 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.36■□□□□ 0.37
CCSO14618 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.36■□□□□ 0.37
CCSO14618 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.36■□□□□ 0.37
CCSO14618 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.36■□□□□ 0.37
CCSO14618 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.36■□□□□ 0.37
CCSO14618 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.36■□□□□ 0.37
CCSO14618 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCSO14618 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.36■□□□□ 0.37
CCSO14618 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCSO14618 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CCSO14618 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 SMG8-203ENST00000578922 2178 ntBASIC17.35■□□□□ 0.37
CCSO14618 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCSO14618 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.35■□□□□ 0.37
CCSO14618 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.35■□□□□ 0.37
CCSO14618 AL031602.1-201ENST00000633169 911 ntBASIC17.35■□□□□ 0.37
CCSO14618 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.35■□□□□ 0.37
CCSO14618 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCSO14618 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.35■□□□□ 0.37
CCSO14618 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.35■□□□□ 0.37
CCSO14618 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSO14618 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSO14618 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCSO14618 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.34■□□□□ 0.37
CCSO14618 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSO14618 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms