RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 NISCHQ9Y2I1 1504 aa38.92■■■■□ 3.82
GTF3C5-202ENST00000372097 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
GTF3C5-202ENST00000372097 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
GTF3C5-202ENST00000372097 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
GTF3C5-202ENST00000372097 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
GTF3C5-202ENST00000372097 DCAF8L2P0C7V8 631 aa32.41■■■□□ 2.78
GTF3C5-202ENST00000372097 HRCP23327 699 aa32.21■■■□□ 2.75
GTF3C5-202ENST00000372097 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
GTF3C5-202ENST00000372097 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
GTF3C5-202ENST00000372097 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
GTF3C5-202ENST00000372097 PCGF6Q9BYE7 350 aa31.73■■■□□ 2.67
GTF3C5-202ENST00000372097 PPARGC1BQ86YN6 1023 aaKnown RBP31.42■■■□□ 2.62
GTF3C5-202ENST00000372097 LOC105371045A0A1W2PR82 267 aa31.16■■■□□ 2.58
GTF3C5-202ENST00000372097 SCRIBQ14160 1630 aa31.1■■■□□ 2.57
GTF3C5-202ENST00000372097 ABCC9O60706 1549 aa31.04■■■□□ 2.56
GTF3C5-202ENST00000372097 TRIM26Q12899 539 aaPredicted RBP30.98■■■□□ 2.55
GTF3C5-202ENST00000372097 NACADO15069 1562 aa30.78■■■□□ 2.52
GTF3C5-202ENST00000372097 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
GTF3C5-202ENST00000372097 ZEB1P37275 1124 aaPredicted RBP30.58■■■□□ 2.49
GTF3C5-202ENST00000372097 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.45
GTF3C5-202ENST00000372097 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
GTF3C5-202ENST00000372097 TRIM41Q8WV44 630 aa30.34■■■□□ 2.45
GTF3C5-202ENST00000372097 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
GTF3C5-202ENST00000372097 PELP1Q8IZL8 1130 aaKnown RBP30.23■■■□□ 2.43
GTF3C5-202ENST00000372097 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
GTF3C5-202ENST00000372097 SCAF1Q9H7N4 1312 aaKnown RBP30.09■■■□□ 2.41
GTF3C5-202ENST00000372097 WIZO95785 1651 aa30.08■■■□□ 2.41
GTF3C5-202ENST00000372097 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
GTF3C5-202ENST00000372097 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
GTF3C5-202ENST00000372097 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
GTF3C5-202ENST00000372097 SMARCA4P51532 1647 aa29.7■■■□□ 2.34
GTF3C5-202ENST00000372097 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.341e-8■■■□□ 15.2
GTF3C5-202ENST00000372097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.61■■■□□ 2.33
GTF3C5-202ENST00000372097 TOP2AP11388 1531 aaKnown RBP29.58■■■□□ 2.33
GTF3C5-202ENST00000372097 ACIN1Q9UKV3 1341 aaKnown RBP29.58■■■□□ 2.33
GTF3C5-202ENST00000372097 CCER1Q8TC90 406 aaPredicted RBP29.55■■■□□ 2.32
GTF3C5-202ENST00000372097 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
GTF3C5-202ENST00000372097 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
GTF3C5-202ENST00000372097 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
GTF3C5-202ENST00000372097 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
GTF3C5-202ENST00000372097 SMARCA2P51531 1590 aa29.42■■■□□ 2.3
GTF3C5-202ENST00000372097 DIEXFQ68CQ4 756 aaKnown RBP29.36■■■□□ 2.29
GTF3C5-202ENST00000372097 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.281e-6■■■■■ 58.5
GTF3C5-202ENST00000372097 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
GTF3C5-202ENST00000372097 CENPBP07199 599 aaPredicted RBP29.26■■■□□ 2.28
GTF3C5-202ENST00000372097 GTF3C3Q9Y5Q9 886 aa29.24■■■□□ 2.27
GTF3C5-202ENST00000372097 CEP162Q5TB80 1403 aa29.14■■■□□ 2.26
GTF3C5-202ENST00000372097 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
GTF3C5-202ENST00000372097 TNIKQ9UKE5 1360 aa29.07■■■□□ 2.24
GTF3C5-202ENST00000372097 TTBK1Q5TCY1 1321 aaPredicted RBP29.05■■■□□ 2.24
GTF3C5-202ENST00000372097 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
GTF3C5-202ENST00000372097 SOGA1O94964 1423 aa28.99■■■□□ 2.23
GTF3C5-202ENST00000372097 ZNF316A6NFI3 1004 aaPredicted RBP28.98■■■□□ 2.23
GTF3C5-202ENST00000372097 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
GTF3C5-202ENST00000372097 EEA1Q15075 1411 aa28.91■■■□□ 2.22
GTF3C5-202ENST00000372097 MYT1Q01538 1121 aa28.89■■■□□ 2.22
GTF3C5-202ENST00000372097 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
GTF3C5-202ENST00000372097 RUSC2Q8N2Y8 1516 aa28.85■■■□□ 2.21
GTF3C5-202ENST00000372097 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
GTF3C5-202ENST00000372097 GOLGA3Q08378 1498 aa28.75■■■□□ 2.19
GTF3C5-202ENST00000372097 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
GTF3C5-202ENST00000372097 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
GTF3C5-202ENST00000372097 MIER1Q8N108 512 aa28.65■■■□□ 2.18
GTF3C5-202ENST00000372097 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
GTF3C5-202ENST00000372097 CEP164Q9UPV0 1460 aa28.52■■■□□ 2.16
GTF3C5-202ENST00000372097 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
GTF3C5-202ENST00000372097 KIF21BO75037 1637 aa28.47■■■□□ 2.15
GTF3C5-202ENST00000372097 CLIP1P30622 1438 aa28.46■■■□□ 2.15
GTF3C5-202ENST00000372097 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
GTF3C5-202ENST00000372097 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
GTF3C5-202ENST00000372097 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
GTF3C5-202ENST00000372097 APLP2Q06481 763 aa28.28■■■□□ 2.12
GTF3C5-202ENST00000372097 RAPGEF2Q9Y4G8 1499 aa28.28■■■□□ 2.12
GTF3C5-202ENST00000372097 BIVM-ERCC5R4GMW8 1640 aa28.27■■■□□ 2.12
GTF3C5-202ENST00000372097 CLSPNQ9HAW4 1339 aa28.23■■■□□ 2.11
GTF3C5-202ENST00000372097 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.11
GTF3C5-202ENST00000372097 CFTRP13569 1480 aa28.19■■■□□ 2.1
GTF3C5-202ENST00000372097 CUX1P39880 1505 aa28.17■■■□□ 2.1
GTF3C5-202ENST00000372097 DHX57Q6P158 1386 aaKnown RBP28.14■■■□□ 2.09
GTF3C5-202ENST00000372097 SUPT16HQ9Y5B9 1047 aaKnown RBP28.03■■■□□ 2.08
GTF3C5-202ENST00000372097 PRXQ9BXM0 1461 aa28.02■■■□□ 2.08
GTF3C5-202ENST00000372097 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
GTF3C5-202ENST00000372097 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
GTF3C5-202ENST00000372097 CC2D2AQ9P2K1 1620 aa27.94■■■□□ 2.06
GTF3C5-202ENST00000372097 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
GTF3C5-202ENST00000372097 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
GTF3C5-202ENST00000372097 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
GTF3C5-202ENST00000372097 KANK4Q5T7N3 995 aaPredicted RBP27.91■■■□□ 2.06
GTF3C5-202ENST00000372097 RRBP1Q9P2E9 1410 aaKnown RBP27.88■■■□□ 2.05
GTF3C5-202ENST00000372097 CUX2O14529 1486 aa27.85■■■□□ 2.05
GTF3C5-202ENST00000372097 TSHZ2Q9NRE2 1034 aa27.75■■■□□ 2.03
GTF3C5-202ENST00000372097 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
GTF3C5-202ENST00000372097 CCNB3Q8WWL7 1395 aa27.72■■■□□ 2.03
GTF3C5-202ENST00000372097 IGF1RP08069 1367 aa27.71■■■□□ 2.03
GTF3C5-202ENST00000372097 FANCD2Q9BXW9 1451 aa27.67■■■□□ 2.02
GTF3C5-202ENST00000372097 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
GTF3C5-202ENST00000372097 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
GTF3C5-202ENST00000372097 CARMIL1Q5VZK9 1371 aa27.59■■■□□ 2.01
GTF3C5-202ENST00000372097 NESP48681 1621 aa27.58■■■□□ 2.01
GTF3C5-202ENST00000372097 MAPKBP1O60336 1514 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms