RNA–Protein interactions for RNA: ENST00000331314.10

DDX59-201, Transcript of DEAD-box helicase 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX59, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59-201ENST00000331314 NISCHQ9Y2I1 1504 aa39.51■■■■□ 3.92
DDX59-201ENST00000331314 SHROOM4Q9ULL8 1493 aa33.87■■■■□ 3.01
DDX59-201ENST00000331314 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
DDX59-201ENST00000331314 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.95
DDX59-201ENST00000331314 SUPT5HO00267 1087 aaKnown RBP33.34■■■□□ 2.93
DDX59-201ENST00000331314 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
DDX59-201ENST00000331314 CHIC1Q5VXU3 224 aa32.6■■■□□ 2.81
DDX59-201ENST00000331314 MYO15BQ96JP2 1530 aa32.59■■■□□ 2.81
DDX59-201ENST00000331314 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
DDX59-201ENST00000331314 HRCP23327 699 aa32.09■■■□□ 2.73
DDX59-201ENST00000331314 PCGF6Q9BYE7 350 aa31.85■■■□□ 2.69
DDX59-201ENST00000331314 ABCC9O60706 1549 aa31.66■■■□□ 2.66
DDX59-201ENST00000331314 LOC105371045A0A1W2PR82 267 aa31.64■■■□□ 2.66
DDX59-201ENST00000331314 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
DDX59-201ENST00000331314 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.61
DDX59-201ENST00000331314 PPARGC1BQ86YN6 1023 aaKnown RBP31.37■■■□□ 2.61
DDX59-201ENST00000331314 TRIM26Q12899 539 aaPredicted RBP31.19■■■□□ 2.58
DDX59-201ENST00000331314 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
DDX59-201ENST00000331314 NACADO15069 1562 aa31.04■■■□□ 2.56
DDX59-201ENST00000331314 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
DDX59-201ENST00000331314 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.52
DDX59-201ENST00000331314 FAM9AQ8IZU1 332 aaPredicted RBP30.79■■■□□ 2.52
DDX59-201ENST00000331314 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
DDX59-201ENST00000331314 ZEB1P37275 1124 aaPredicted RBP30.61■■■□□ 2.49
DDX59-201ENST00000331314 WIZO95785 1651 aa30.6■■■□□ 2.49
DDX59-201ENST00000331314 EHMT2Q96KQ7 1210 aa30.52■■■□□ 2.48
DDX59-201ENST00000331314 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
DDX59-201ENST00000331314 EIF4G1Q04637 1599 aaKnown RBP30.36■■■□□ 2.45
DDX59-201ENST00000331314 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
DDX59-201ENST00000331314 TOP2AP11388 1531 aaKnown RBP30.11■■■□□ 2.41
DDX59-201ENST00000331314 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
DDX59-201ENST00000331314 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
DDX59-201ENST00000331314 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
DDX59-201ENST00000331314 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
DDX59-201ENST00000331314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.88■■■□□ 2.37
DDX59-201ENST00000331314 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
DDX59-201ENST00000331314 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
DDX59-201ENST00000331314 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.36
DDX59-201ENST00000331314 CCER1Q8TC90 406 aaPredicted RBP29.8■■■□□ 2.36
DDX59-201ENST00000331314 SOGA1O94964 1423 aa29.79■■■□□ 2.36
DDX59-201ENST00000331314 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
DDX59-201ENST00000331314 SCAF1Q9H7N4 1312 aaKnown RBP29.74■■■□□ 2.35
DDX59-201ENST00000331314 TNIKQ9UKE5 1360 aa29.72■■■□□ 2.35
DDX59-201ENST00000331314 EEA1Q15075 1411 aa29.67■■■□□ 2.34
DDX59-201ENST00000331314 RUSC2Q8N2Y8 1516 aa29.65■■■□□ 2.34
DDX59-201ENST00000331314 CSRNP3Q8WYN3 585 aa29.62■■■□□ 2.33
DDX59-201ENST00000331314 TTBK1Q5TCY1 1321 aaPredicted RBP29.61■■■□□ 2.33
DDX59-201ENST00000331314 UBTFP17480 764 aaKnown RBP29.51■■■□□ 2.31
DDX59-201ENST00000331314 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
DDX59-201ENST00000331314 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.3
DDX59-201ENST00000331314 PELP1Q8IZL8 1130 aaKnown RBP29.4■■■□□ 2.3
DDX59-201ENST00000331314 DIEXFQ68CQ4 756 aaKnown RBP29.4■■■□□ 2.3
DDX59-201ENST00000331314 ACIN1Q9UKV3 1341 aaKnown RBP29.36■■■□□ 2.29
DDX59-201ENST00000331314 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
DDX59-201ENST00000331314 NEUROD1Q13562 356 aa29.3■■■□□ 2.28
DDX59-201ENST00000331314 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
DDX59-201ENST00000331314 KIF21BO75037 1637 aa29.28■■■□□ 2.28
DDX59-201ENST00000331314 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
DDX59-201ENST00000331314 CLIP1P30622 1438 aa29.16■■■□□ 2.26
DDX59-201ENST00000331314 ZNF316A6NFI3 1004 aaPredicted RBP29.11■■■□□ 2.25
DDX59-201ENST00000331314 CENPBP07199 599 aaPredicted RBP29.11■■■□□ 2.25
DDX59-201ENST00000331314 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
DDX59-201ENST00000331314 VPS8Q8N3P4 1428 aa29.08■■■□□ 2.25
DDX59-201ENST00000331314 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
DDX59-201ENST00000331314 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
DDX59-201ENST00000331314 GTF3C3Q9Y5Q9 886 aa29.01■■■□□ 2.24
DDX59-201ENST00000331314 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
DDX59-201ENST00000331314 APLP2Q06481 763 aa28.89■■■□□ 2.21
DDX59-201ENST00000331314 BIVM-ERCC5R4GMW8 1640 aa28.84■■■□□ 2.21
DDX59-201ENST00000331314 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
DDX59-201ENST00000331314 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
DDX59-201ENST00000331314 MIER1Q8N108 512 aa28.74■■■□□ 2.19
DDX59-201ENST00000331314 PRXQ9BXM0 1461 aa28.74■■■□□ 2.19
DDX59-201ENST00000331314 YTHDC1Q96MU7 727 aaKnown RBP28.69■■■□□ 2.18
DDX59-201ENST00000331314 ARAP1Q96P48 1450 aa28.69■■■□□ 2.18
DDX59-201ENST00000331314 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
DDX59-201ENST00000331314 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
DDX59-201ENST00000331314 CUX1P39880 1505 aa28.61■■■□□ 2.17
DDX59-201ENST00000331314 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
DDX59-201ENST00000331314 DHX57Q6P158 1386 aaKnown RBP28.56■■■□□ 2.16
DDX59-201ENST00000331314 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
DDX59-201ENST00000331314 CLSPNQ9HAW4 1339 aa28.56■■■□□ 2.16
DDX59-201ENST00000331314 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
DDX59-201ENST00000331314 RRBP1Q9P2E9 1410 aaKnown RBP28.46■■■□□ 2.15
DDX59-201ENST00000331314 CFTRP13569 1480 aa28.42■■■□□ 2.14
DDX59-201ENST00000331314 ARHGAP35Q9NRY4 1499 aa28.39■■■□□ 2.14
DDX59-201ENST00000331314 CUX2O14529 1486 aa28.35■■■□□ 2.13
DDX59-201ENST00000331314 CCNB3Q8WWL7 1395 aa28.31■■■□□ 2.12
DDX59-201ENST00000331314 PRDM2Q13029 1718 aa28.22■■■□□ 2.11
DDX59-201ENST00000331314 IGF1RP08069 1367 aa28.19■■■□□ 2.1
DDX59-201ENST00000331314 ITGAEP38570 1179 aa28.15■■■□□ 2.1
DDX59-201ENST00000331314 TIAM1Q13009 1591 aa28.13■■■□□ 2.09
DDX59-201ENST00000331314 MAP3K1Q13233 1512 aa28.11■■■□□ 2.09
DDX59-201ENST00000331314 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
DDX59-201ENST00000331314 RAB3GAP2Q9H2M9 1393 aa28.09■■■□□ 2.09
DDX59-201ENST00000331314 CARMIL1Q5VZK9 1371 aa28.07■■■□□ 2.08
DDX59-201ENST00000331314 MAPKBP1O60336 1514 aa28.06■■■□□ 2.08
DDX59-201ENST00000331314 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
DDX59-201ENST00000331314 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
DDX59-201ENST00000331314 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms