Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA13Q9Y5I0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHA13Q9Y5I0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA13Q9Y5I0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PCDHA13Q9Y5I0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA13Q9Y5I0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHA13Q9Y5I0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.18
PCDHA13Q9Y5I0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHA13Q9Y5I0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHA13Q9Y5I0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHA13Q9Y5I0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PCDHA13Q9Y5I0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHA13Q9Y5I0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 AC131281.2-201ENST00000520478 145 ntBASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA13Q9Y5I0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 AC121338.2-201ENST00000622535 1744 ntBASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA13Q9Y5I0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA13Q9Y5I0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 BX842568.3-201ENST00000418104 571 ntBASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHA13Q9Y5I0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA13Q9Y5I0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms