Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL2P13500 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL2P13500 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL2P13500 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL2P13500 AP001160.3-201ENST00000601484 763 ntBASIC18.28■□□□□ 0.52
CCL2P13500 AC061975.6-201ENST00000579045 1553 ntBASIC18.28■□□□□ 0.52
CCL2P13500 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL2P13500 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL2P13500 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL2P13500 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL2P13500 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL2P13500 AF106564.1-201ENST00000607058 2553 ntBASIC18.28■□□□□ 0.52
CCL2P13500 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.27■□□□□ 0.52
CCL2P13500 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CCL2P13500 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL2P13500 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL2P13500 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL2P13500 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL2P13500 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL2P13500 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL2P13500 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.27■□□□□ 0.52
CCL2P13500 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL2P13500 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.27■□□□□ 0.52
CCL2P13500 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL2P13500 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL2P13500 AL137060.1-201ENST00000618151 2648 ntBASIC18.27■□□□□ 0.51
CCL2P13500 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL2P13500 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL2P13500 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCL2P13500 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCL2P13500 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL2P13500 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
CCL2P13500 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
CCL2P13500 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCL2P13500 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL2P13500 KRT19P1-201ENST00000405746 1186 ntBASIC18.26■□□□□ 0.51
CCL2P13500 AC138907.5-202ENST00000569484 235 ntBASIC18.26■□□□□ 0.51
CCL2P13500 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCL2P13500 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL2P13500 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL2P13500 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL2P13500 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.26■□□□□ 0.51
CCL2P13500 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.26■□□□□ 0.51
CCL2P13500 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCL2P13500 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL2P13500 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL2P13500 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL2P13500 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL2P13500 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL2P13500 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL2P13500 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL2P13500 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL2P13500 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL2P13500 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL2P13500 AC010141.2-201ENST00000452426 721 ntBASIC18.25■□□□□ 0.51
CCL2P13500 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL2P13500 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL2P13500 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL2P13500 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL2P13500 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CCL2P13500 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL2P13500 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
CCL2P13500 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL2P13500 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCL2P13500 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL2P13500 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL2P13500 AL024507.2-201ENST00000606070 2574 ntBASIC18.24■□□□□ 0.51
CCL2P13500 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CCL2P13500 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL2P13500 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.24■□□□□ 0.51
CCL2P13500 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL2P13500 SLC7A5P2-201ENST00000553010 536 ntBASIC18.24■□□□□ 0.51
CCL2P13500 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL2P13500 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL2P13500 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL2P13500 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 CLDN5-201ENST00000403084 2357 ntBASIC18.23■□□□□ 0.51
CCL2P13500 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCL2P13500 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL2P13500 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL2P13500 AC137761.2-201ENST00000561729 223 ntBASIC18.23■□□□□ 0.51
CCL2P13500 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.23■□□□□ 0.51
CCL2P13500 AC145350.3-201ENST00000569033 163 ntBASIC18.23■□□□□ 0.51
CCL2P13500 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL2P13500 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL2P13500 AC008175.2-201ENST00000612840 297 ntBASIC18.23■□□□□ 0.51
CCL2P13500 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL2P13500 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL2P13500 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCL2P13500 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL2P13500 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL2P13500 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms