Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 MIR6084-201ENST00000622012 110 ntBASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV1A0A0A0MS02 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRGV1A0A0A0MS02 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 AC055733.4-201ENST00000638462 1354 ntBASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 AC005229.4-201ENST00000610085 2198 ntBASIC15.17■□□□□ 0.02
TRGV1A0A0A0MS02 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV1A0A0A0MS02 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 AF106564.1-201ENST00000607058 2553 ntBASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms