Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC00588Q9Y4M8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00588Q9Y4M8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00588Q9Y4M8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC00588Q9Y4M8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.37■□□□□ 0.53
LINC00588Q9Y4M8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC00588Q9Y4M8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00588Q9Y4M8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00588Q9Y4M8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00588Q9Y4M8 ABHD17AP4-201ENST00000411545 909 ntBASIC18.34■□□□□ 0.53
LINC00588Q9Y4M8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00588Q9Y4M8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00588Q9Y4M8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00588Q9Y4M8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00588Q9Y4M8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00588Q9Y4M8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00588Q9Y4M8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00588Q9Y4M8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LINC00588Q9Y4M8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00588Q9Y4M8 AL161658.1-201ENST00000623641 1967 ntBASIC18.31■□□□□ 0.52
LINC00588Q9Y4M8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.3■□□□□ 0.52
LINC00588Q9Y4M8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LINC00588Q9Y4M8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LINC00588Q9Y4M8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC00588Q9Y4M8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00588Q9Y4M8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC00588Q9Y4M8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.29■□□□□ 0.52
LINC00588Q9Y4M8 AC108673.1-201ENST00000510422 1159 ntBASIC18.29■□□□□ 0.52
LINC00588Q9Y4M8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00588Q9Y4M8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LINC00588Q9Y4M8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC00588Q9Y4M8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LINC00588Q9Y4M8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.27■□□□□ 0.52
LINC00588Q9Y4M8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC00588Q9Y4M8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 MIR6090-201ENST00000622481 60 ntBASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00588Q9Y4M8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00588Q9Y4M8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC00588Q9Y4M8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00588Q9Y4M8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00588Q9Y4M8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00588Q9Y4M8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00588Q9Y4M8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LINC00588Q9Y4M8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00588Q9Y4M8 DUX4L29-201ENST00000425409 679 ntBASIC18.24■□□□□ 0.51
LINC00588Q9Y4M8 MIR7108-201ENST00000614319 87 ntBASIC18.24■□□□□ 0.51
LINC00588Q9Y4M8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00588Q9Y4M8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC00588Q9Y4M8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC00588Q9Y4M8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC00588Q9Y4M8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00588Q9Y4M8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00588Q9Y4M8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00588Q9Y4M8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00588Q9Y4M8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00588Q9Y4M8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00588Q9Y4M8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00588Q9Y4M8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00588Q9Y4M8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC00588Q9Y4M8 ZNRF2P2-203ENST00000454624 420 ntBASIC18.2■□□□□ 0.5
LINC00588Q9Y4M8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00588Q9Y4M8 AC021231.2-201ENST00000594613 730 ntBASIC18.19■□□□□ 0.5
LINC00588Q9Y4M8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00588Q9Y4M8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00588Q9Y4M8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.17■□□□□ 0.5
LINC00588Q9Y4M8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00588Q9Y4M8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00588Q9Y4M8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00588Q9Y4M8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00588Q9Y4M8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00588Q9Y4M8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00588Q9Y4M8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00588Q9Y4M8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00588Q9Y4M8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms