Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC42SE2Q9NRR3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42SE2Q9NRR3 AL135925.1-201ENST00000605920 1701 ntBASIC18.35■□□□□ 0.53
CDC42SE2Q9NRR3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC42SE2Q9NRR3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDC42SE2Q9NRR3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42SE2Q9NRR3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42SE2Q9NRR3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42SE2Q9NRR3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42SE2Q9NRR3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42SE2Q9NRR3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42SE2Q9NRR3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42SE2Q9NRR3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC42SE2Q9NRR3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC42SE2Q9NRR3 AP002365.1-201ENST00000603448 772 ntBASIC18.3■□□□□ 0.52
CDC42SE2Q9NRR3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42SE2Q9NRR3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42SE2Q9NRR3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC42SE2Q9NRR3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.29■□□□□ 0.52
CDC42SE2Q9NRR3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC42SE2Q9NRR3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CDC42SE2Q9NRR3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDC42SE2Q9NRR3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC42SE2Q9NRR3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC42SE2Q9NRR3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDC42SE2Q9NRR3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDC42SE2Q9NRR3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDC42SE2Q9NRR3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC42SE2Q9NRR3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC42SE2Q9NRR3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDC42SE2Q9NRR3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDC42SE2Q9NRR3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42SE2Q9NRR3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42SE2Q9NRR3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42SE2Q9NRR3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42SE2Q9NRR3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.24■□□□□ 0.51
CDC42SE2Q9NRR3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42SE2Q9NRR3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDC42SE2Q9NRR3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDC42SE2Q9NRR3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42SE2Q9NRR3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42SE2Q9NRR3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDC42SE2Q9NRR3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.22■□□□□ 0.51
CDC42SE2Q9NRR3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42SE2Q9NRR3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDC42SE2Q9NRR3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDC42SE2Q9NRR3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42SE2Q9NRR3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42SE2Q9NRR3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC42SE2Q9NRR3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42SE2Q9NRR3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42SE2Q9NRR3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42SE2Q9NRR3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC42SE2Q9NRR3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42SE2Q9NRR3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42SE2Q9NRR3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC42SE2Q9NRR3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC42SE2Q9NRR3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDC42SE2Q9NRR3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42SE2Q9NRR3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC42SE2Q9NRR3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 WASH5P-204ENST00000632292 975 ntBASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.15■□□□□ 0.5
CDC42SE2Q9NRR3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDC42SE2Q9NRR3 AC142086.6-201ENST00000621154 1765 ntBASIC18.14■□□□□ 0.5
CDC42SE2Q9NRR3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
CDC42SE2Q9NRR3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42SE2Q9NRR3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC42SE2Q9NRR3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42SE2Q9NRR3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDC42SE2Q9NRR3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42SE2Q9NRR3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42SE2Q9NRR3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42SE2Q9NRR3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDC42SE2Q9NRR3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42SE2Q9NRR3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42SE2Q9NRR3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.12■□□□□ 0.49
CDC42SE2Q9NRR3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.12■□□□□ 0.49
CDC42SE2Q9NRR3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42SE2Q9NRR3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42SE2Q9NRR3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC42SE2Q9NRR3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC42SE2Q9NRR3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.11■□□□□ 0.49
CDC42SE2Q9NRR3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDC42SE2Q9NRR3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDC42SE2Q9NRR3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDC42SE2Q9NRR3 AL139393.2-201ENST00000608721 2025 ntBASIC18.1■□□□□ 0.49
CDC42SE2Q9NRR3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.1■□□□□ 0.49
CDC42SE2Q9NRR3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDC42SE2Q9NRR3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms