Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 GPM6B-208ENST00000475307 678 ntTSL 314.91□□□□□ -0.026e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-209ENST00000493085 558 ntTSL 313.55□□□□□ -0.246e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.756e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC10.05□□□□□ -0.86e-9■■■□□ 17.4
DDX21Q9NR30 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.53□□□□□ -0.886e-9■■■□□ 17.4
DDX21Q9NR30 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.378e-8■■■□□ 17.2
DDX21Q9NR30 FAM98B-204ENST00000559431 305 ntTSL 513.18□□□□□ -0.38e-8■■■□□ 17.2
DDX21Q9NR30 SEC13-207ENST00000397105 883 ntTSL 227.05■■□□□ 1.923e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-210ENST00000428626 567 ntTSL 320.31■□□□□ 0.843e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-213ENST00000445064 669 ntTSL 520.18■□□□□ 0.823e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-206ENST00000397102 582 ntTSL 320.06■□□□□ 0.83e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.763e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.623e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-212ENST00000432213 594 ntTSL 418.63■□□□□ 0.573e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-211ENST00000431352 832 ntTSL 518.15■□□□□ 0.53e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-204ENST00000397099 555 ntTSL 418.11■□□□□ 0.493e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-205ENST00000397101 592 ntTSL 218.06■□□□□ 0.483e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.473e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC16.99■□□□□ 0.313e-7■■■□□ 17.1
DDX21Q9NR30 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.73■□□□□ 0.273e-7■■■□□ 17.1
DDX21Q9NR30 WDFY2-202ENST00000460145 395 ntTSL 510.9□□□□□ -0.663e-7■■■□□ 17.1
DDX21Q9NR30 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.773e-7■■■□□ 17.1
DDX21Q9NR30 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.112e-9■■■□□ 16.3
DDX21Q9NR30 PHKB-207ENST00000566037 1032 ntTSL 230.36■■■□□ 2.453e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-203ENST00000563376 697 ntTSL 317.76■□□□□ 0.433e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.013e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC14.69□□□□□ -0.063e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-217ENST00000570047 797 ntTSL 313.64□□□□□ -0.233e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-214ENST00000567402 1617 ntTSL 1 (best)13.14□□□□□ -0.313e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC11.82□□□□□ -0.523e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.49□□□□□ -0.893e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-210ENST00000511802 4734 ntTSL 29.19□□□□□ -0.943e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.63□□□□□ -1.033e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.23e-8■■■□□ 16.1
DDX21Q9NR30 PHKB-206ENST00000565424 828 ntTSL 36.38□□□□□ -1.393e-8■■■□□ 16.1
DDX21Q9NR30 MARCH6-214ENST00000606497 1334 ntTSL 46.23□□□□□ -1.413e-8■■■□□ 16.1
DDX21Q9NR30 NR2F2-AS1-202ENST00000557863 515 ntTSL 320.69■□□□□ 0.96e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC15.65■□□□□ 0.16e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC13.28□□□□□ -0.286e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC12.6□□□□□ -0.396e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.75□□□□□ -1.016e-11■■■□□ 16
DDX21Q9NR30 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.56□□□□□ -1.686e-11■■■□□ 16
DDX21Q9NR30 SYNCRIP-203ENST00000444272 610 ntTSL 320.38■□□□□ 0.852e-7■■■□□ 15.8
DDX21Q9NR30 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.592e-7■■■□□ 15.8
DDX21Q9NR30 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.59■■■□□ 2.012e-13■■■□□ 15.8
DDX21Q9NR30 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.47■□□□□ 0.551e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-216ENST00000541416 996 ntTSL 216.22■□□□□ 0.191e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC14.79□□□□□ -0.041e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-209ENST00000538654 2768 ntTSL 210.23□□□□□ -0.771e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC9.96□□□□□ -0.821e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.27□□□□□ -1.091e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.43□□□□□ -1.221e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-207ENST00000537965 578 ntTSL 57.02□□□□□ -1.291e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.93□□□□□ -1.31e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.81□□□□□ -1.321e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-214ENST00000540865 784 ntTSL 56.32□□□□□ -1.41e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.78□□□□□ -1.481e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-220ENST00000544550 636 ntTSL 25.66□□□□□ -1.51e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-224ENST00000545688 610 ntTSL 35.53□□□□□ -1.521e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.45□□□□□ -1.541e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-203ENST00000537024 532 ntTSL 55.4□□□□□ -1.541e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-222ENST00000545308 646 ntTSL 25.21□□□□□ -1.581e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.15□□□□□ -1.591e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.79□□□□□ -1.641e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.01□□□□□ -1.771e-323■■■□□ 15.6
DDX21Q9NR30 SNHG1-202ENST00000535689 550 ntTSL 23.98□□□□□ -1.771e-323■■■□□ 15.6
DDX21Q9NR30 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.331e-323■■■□□ 15.6
DDX21Q9NR30 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.17■■□□□ 1.462e-6■■■□□ 15.5
DDX21Q9NR30 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.25■■□□□ 1.152e-6■■■□□ 15.5
DDX21Q9NR30 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.7■■□□□ 1.062e-6■■■□□ 15.5
DDX21Q9NR30 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.892e-6■■■□□ 15.5
DDX21Q9NR30 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.26■□□□□ 0.672e-6■■■□□ 15.5
DDX21Q9NR30 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.592e-6■■■□□ 15.5
DDX21Q9NR30 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-6■■■□□ 15.5
DDX21Q9NR30 NMU-206ENST00000515325 616 ntTSL 36.55□□□□□ -1.362e-6■■■□□ 15.5
DDX21Q9NR30 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.97■□□□□ 0.791e-14■■■□□ 14.9
DDX21Q9NR30 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.591e-14■■■□□ 14.9
DDX21Q9NR30 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.64■□□□□ 0.572e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC14.5□□□□□ -0.092e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-224ENST00000454068 688 ntTSL 5 BASIC12.7□□□□□ -0.382e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-214ENST00000436656 822 ntTSL 312.39□□□□□ -0.432e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-216ENST00000443799 897 ntTSL 512.39□□□□□ -0.432e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-203ENST00000416952 799 ntTSL 212□□□□□ -0.492e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-210ENST00000431268 1698 ntTSL 211.41□□□□□ -0.582e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-219ENST00000449289 542 ntTSL 3 BASIC10.43□□□□□ -0.742e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-220ENST00000449589 712 ntTSL 310.43□□□□□ -0.742e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-226ENST00000455838 632 ntTSL 210.43□□□□□ -0.742e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-211ENST00000432536 959 ntTSL 2 BASIC9.58□□□□□ -0.882e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-227ENST00000456293 583 ntTSL 39.33□□□□□ -0.922e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-228ENST00000456812 723 ntTSL 38.9□□□□□ -0.982e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-206ENST00000422183 745 ntTSL 27.83□□□□□ -1.162e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.71□□□□□ -1.182e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-201ENST00000412059 979 ntTSL 57.27□□□□□ -1.252e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-204ENST00000421068 1060 ntTSL 26.85□□□□□ -1.312e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-205ENST00000422008 497 ntTSL 36.07□□□□□ -1.442e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-215ENST00000442067 1114 ntTSL 26.06□□□□□ -1.442e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.94□□□□□ -1.462e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.08□□□□□ -1.62e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-213ENST00000436285 772 ntTSL 24.48□□□□□ -1.692e-26■■■□□ 14.6
DDX21Q9NR30 GAS5-229ENST00000458220 469 ntTSL 24.44□□□□□ -1.72e-26■■■□□ 14.6
Retrieved 100 of 1,140 protein–RNA pairs in 200.5 ms