RNA–Protein interactions for RNA: ENST00000452197.5

GAS5-223, Transcript of growth arrest specific 5, human

TSL 3 BASIC

Gene GAS5, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GAS5-223	ENST00000452197	AEBP2	Q6ZN18	517 aa	Predicted RBP	17.29	■□□□□ 0.36
GAS5-223	ENST00000452197	CHIC1	Q5VXU3	224 aa		16.77	■□□□□ 0.28
GAS5-223	ENST00000452197	PHF23	Q9BUL5	403 aa	Predicted RBP	14.75	□□□□□ -0.05
GAS5-223	ENST00000452197	SENP3	Q9H4L4	574 aa	Predicted RBP	14.65	□□□□□ -0.06
GAS5-223	ENST00000452197	FOXD1	Q16676	465 aa		13.62	□□□□□ -0.23
GAS5-223	ENST00000452197	PLPPR3	Q6T4P5	718 aa		13.57	□□□□□ -0.24
GAS5-223	ENST00000452197	PPP6R1	Q9UPN7	881 aa		13.05	□□□□□ -0.32
GAS5-223	ENST00000452197	ADRA2B	P18089	450 aa		13.02	□□□□□ -0.33
GAS5-223	ENST00000452197	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.84	□□□□□ -0.35
GAS5-223	ENST00000452197	MSH5	O43196	834 aa		12.58	□□□□□ -0.4
GAS5-223	ENST00000452197	PPP4R3CP	Q6ZMV5	832 aa		11.96	□□□□□ -0.49
GAS5-223	ENST00000452197	SCAF1	Q9H7N4	1312 aa	Known RBP	11.87	□□□□□ -0.51
GAS5-223	ENST00000452197	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.84	□□□□□ -0.51
GAS5-223	ENST00000452197	DMRT2	Q9Y5R5	561 aa		11.69	□□□□□ -0.54
GAS5-223	ENST00000452197	CNKSR2	Q8WXI2	1034 aa		11.63	□□□□□ -0.55
GAS5-223	ENST00000452197	POTED	Q86YR6	584 aa		11.62	□□□□□ -0.55
GAS5-223	ENST00000452197	KCNA4	P22459	653 aa		11.6	□□□□□ -0.55
GAS5-223	ENST00000452197	NCBP3	Q53F19	620 aa	Known RBP	11.59	□□□□□ -0.55
GAS5-223	ENST00000452197	NPM3	O75607	178 aa	Known RBP	11.46	□□□□□ -0.57
GAS5-223	ENST00000452197	RNF216	Q9NWF9	866 aa	Predicted RBP	11.43	□□□□□ -0.58
GAS5-223	ENST00000452197	HOXD11	P31277	338 aa	Predicted RBP	11.41	□□□□□ -0.58
GAS5-223	ENST00000452197	DCAF8L1	A6NGE4	600 aa		11.19	□□□□□ -0.62
GAS5-223	ENST00000452197	DNAJC5B	Q9UF47	199 aa		11.1	□□□□□ -0.63
GAS5-223	ENST00000452197	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.02	□□□□□ -0.65
GAS5-223	ENST00000452197	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.87	□□□□□ -0.67	7e-8	■□□□□ 9.1
GAS5-223	ENST00000452197	SLC4A2	P04920	1241 aa		10.84	□□□□□ -0.67
GAS5-223	ENST00000452197	RNF39	Q9H2S5	420 aa		10.78	□□□□□ -0.68
GAS5-223	ENST00000452197		U3KPZ7	1027 aa	Predicted RBP	10.71	□□□□□ -0.69
GAS5-223	ENST00000452197	ZBTB22	O15209	634 aa		10.69	□□□□□ -0.7
GAS5-223	ENST00000452197	FOXD4L1	Q9NU39	408 aa		10.69	□□□□□ -0.7
GAS5-223	ENST00000452197	EHMT2	Q96KQ7	1210 aa		10.64	□□□□□ -0.71
GAS5-223	ENST00000452197	C1QBP	Q07021	282 aa	Known RBP	10.63	□□□□□ -0.71
GAS5-223	ENST00000452197	MYCN	P04198	464 aa	Predicted RBP	10.58	□□□□□ -0.72
GAS5-223	ENST00000452197	CACNB1	Q02641	598 aa	Predicted RBP	10.56	□□□□□ -0.72
GAS5-223	ENST00000452197	CSRNP3	Q8WYN3	585 aa		10.53	□□□□□ -0.72
GAS5-223	ENST00000452197	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.5	□□□□□ -0.73
GAS5-223	ENST00000452197	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.5	□□□□□ -0.73
GAS5-223	ENST00000452197	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.47	□□□□□ -0.73
GAS5-223	ENST00000452197	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.43	□□□□□ -0.74
GAS5-223	ENST00000452197	APLP2	Q06481	763 aa		10.4	□□□□□ -0.74
GAS5-223	ENST00000452197	CAPN15	O75808	1086 aa		10.38	□□□□□ -0.75
GAS5-223	ENST00000452197	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.33	□□□□□ -0.76
GAS5-223	ENST00000452197	TRH	P20396	242 aa	Predicted RBP	10.32	□□□□□ -0.76
GAS5-223	ENST00000452197	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.3	□□□□□ -0.76
GAS5-223	ENST00000452197	ATXN8OS	P0DMR3	200 aa		10.29	□□□□□ -0.76
GAS5-223	ENST00000452197	DSG3	P32926	999 aa		10.23	□□□□□ -0.77
GAS5-223	ENST00000452197	ABCB7	O75027	752 aa		10.2	□□□□□ -0.78
GAS5-223	ENST00000452197	POLA2	Q14181	598 aa		10.12	□□□□□ -0.79
GAS5-223	ENST00000452197	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.93	□□□□□ -0.82
GAS5-223	ENST00000452197	MKRN4P	Q13434	485 aa	Predicted RBP	9.87	□□□□□ -0.83
GAS5-223	ENST00000452197	FBLN2	P98095	1184 aa		9.86	□□□□□ -0.83
GAS5-223	ENST00000452197	OSCAR	Q8IYS5	282 aa		9.82	□□□□□ -0.84
GAS5-223	ENST00000452197	RBM42	Q9BTD8	480 aa	Known RBP	9.74	□□□□□ -0.85
GAS5-223	ENST00000452197	SPDYE2B	A6NHP3	402 aa		9.66	□□□□□ -0.86
GAS5-223	ENST00000452197	SPDYE6	P0CI01	402 aa		9.66	□□□□□ -0.86
GAS5-223	ENST00000452197	SPDYE2	Q495Y8	402 aa		9.66	□□□□□ -0.86
GAS5-223	ENST00000452197	ZNF692	Q9BU19	519 aa	Predicted RBP	9.61	□□□□□ -0.87
GAS5-223	ENST00000452197	SSUH2	Q9Y2M2	353 aa		9.6	□□□□□ -0.87
GAS5-223	ENST00000452197	SPDYE4	A6NLX3	237 aa		9.59	□□□□□ -0.87
GAS5-223	ENST00000452197	AKT1S1	Q96B36	256 aa		9.59	□□□□□ -0.87
GAS5-223	ENST00000452197	FKBP8	Q14318	412 aa		9.53	□□□□□ -0.88
GAS5-223	ENST00000452197	REM2	Q8IYK8	340 aa	Predicted RBP	9.52	□□□□□ -0.89
GAS5-223	ENST00000452197	PABPN1	Q86U42	306 aa	Known RBP eCLIP	9.5	□□□□□ -0.89
GAS5-223	ENST00000452197	PITPNM1	O00562	1244 aa		9.42	□□□□□ -0.9
GAS5-223	ENST00000452197	PROM2	Q8N271	834 aa		9.42	□□□□□ -0.9
GAS5-223	ENST00000452197	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.4	□□□□□ -0.9
GAS5-223	ENST00000452197	CHRDL2	Q6WN34	429 aa		9.38	□□□□□ -0.91
GAS5-223	ENST00000452197	CLEC11A	Q9Y240	323 aa		9.38	□□□□□ -0.91
GAS5-223	ENST00000452197	STAG3	Q9UJ98	1225 aa		9.28	□□□□□ -0.92
GAS5-223	ENST00000452197	PRR29	P0C7W0	189 aa		9.26	□□□□□ -0.93
GAS5-223	ENST00000452197	PIP4P2	Q8N4L2	257 aa		9.25	□□□□□ -0.93
GAS5-223	ENST00000452197	FXR2	P51116	673 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
GAS5-223	ENST00000452197	POTEH	Q6S545	545 aa		9.19	□□□□□ -0.94
GAS5-223	ENST00000452197	PRKAR2A	P13861	404 aa	Known RBP	9.18	□□□□□ -0.94
GAS5-223	ENST00000452197	FBXO3	Q9UK99	471 aa		9.18	□□□□□ -0.94
GAS5-223	ENST00000452197	CHADL	Q6NUI6	762 aa		9.17	□□□□□ -0.94
GAS5-223	ENST00000452197	CREBZF	Q9NS37	354 aa		9.15	□□□□□ -0.94
GAS5-223	ENST00000452197	DNAJC5	Q9H3Z4	198 aa		9.14	□□□□□ -0.95
GAS5-223	ENST00000452197	VASP	P50552	380 aa	Predicted RBP	9.09	□□□□□ -0.95
GAS5-223	ENST00000452197	NISCH	Q9Y2I1	1504 aa		9.09	□□□□□ -0.95
GAS5-223	ENST00000452197	MIER1	Q8N108	512 aa		9.08	□□□□□ -0.96
GAS5-223	ENST00000452197	PLCD3	Q8N3E9	789 aa		9.07	□□□□□ -0.96
GAS5-223	ENST00000452197	FARP1	Q9Y4F1	1045 aa	Predicted RBP	9.06	□□□□□ -0.96
GAS5-223	ENST00000452197	PLEKHG5	O94827	1062 aa		9.04	□□□□□ -0.96
GAS5-223	ENST00000452197	MNX1	P50219	401 aa	Predicted RBP	9.04	□□□□□ -0.96
GAS5-223	ENST00000452197	HAX1	O00165	279 aa		8.96	□□□□□ -0.98
GAS5-223	ENST00000452197	NPM1	P06748	294 aa	Known RBP eCLIP	8.96	□□□□□ -0.98	1e-27	■■□□□ 12.8
GAS5-223	ENST00000452197	IFNLR1	Q8IU57	520 aa	Predicted RBP	8.96	□□□□□ -0.98
GAS5-223	ENST00000452197	ZBTB47	Q9UFB7	747 aa	Predicted RBP	8.96	□□□□□ -0.98
GAS5-223	ENST00000452197	C19orf67	A6NJJ6	358 aa		8.93	□□□□□ -0.98
GAS5-223	ENST00000452197	KLHL34	Q8N239	644 aa		8.93	□□□□□ -0.98
GAS5-223	ENST00000452197	CD44	P16070	742 aa	Known RBP	8.91	□□□□□ -0.98
GAS5-223	ENST00000452197	EVX2	Q03828	476 aa		8.9	□□□□□ -0.98
GAS5-223	ENST00000452197	NUBP1	P53384	320 aa		8.88	□□□□□ -0.99
GAS5-223	ENST00000452197	RASEF	Q8IZ41	740 aa		8.88	□□□□□ -0.99
GAS5-223	ENST00000452197	SPOCK2	Q92563	424 aa		8.85	□□□□□ -0.99
GAS5-223	ENST00000452197	ZRANB1	Q9UGI0	708 aa		8.85	□□□□□ -0.99
GAS5-223	ENST00000452197	PAK3	O75914	559 aa	Predicted RBP	8.84	□□□□□ -0.99
GAS5-223	ENST00000452197	TSPYL2	Q9H2G4	693 aa	Predicted RBP	8.84	□□□□□ -0.99
GAS5-223	ENST00000452197	FAM212A	Q96EL1	285 aa		8.81	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms