RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 NISCHQ9Y2I1 1504 aa30.33■■■□□ 2.45
SEC13-203ENST00000383801 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
SEC13-203ENST00000383801 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
SEC13-203ENST00000383801 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
SEC13-203ENST00000383801 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
SEC13-203ENST00000383801 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
SEC13-203ENST00000383801 ABCC9O60706 1549 aa24.62■■□□□ 1.53
SEC13-203ENST00000383801 NACADO15069 1562 aa24.6■■□□□ 1.53
SEC13-203ENST00000383801 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
SEC13-203ENST00000383801 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
SEC13-203ENST00000383801 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
SEC13-203ENST00000383801 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
SEC13-203ENST00000383801 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
SEC13-203ENST00000383801 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
SEC13-203ENST00000383801 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
SEC13-203ENST00000383801 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
SEC13-203ENST00000383801 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
SEC13-203ENST00000383801 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
SEC13-203ENST00000383801 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
SEC13-203ENST00000383801 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
SEC13-203ENST00000383801 WIZO95785 1651 aa23.15■■□□□ 1.3
SEC13-203ENST00000383801 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
SEC13-203ENST00000383801 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
SEC13-203ENST00000383801 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
SEC13-203ENST00000383801 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
SEC13-203ENST00000383801 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
SEC13-203ENST00000383801 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
SEC13-203ENST00000383801 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
SEC13-203ENST00000383801 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
SEC13-203ENST00000383801 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
SEC13-203ENST00000383801 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
SEC13-203ENST00000383801 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
SEC13-203ENST00000383801 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
SEC13-203ENST00000383801 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
SEC13-203ENST00000383801 CFTRP13569 1480 aa22.2■■□□□ 1.14
SEC13-203ENST00000383801 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
SEC13-203ENST00000383801 EEA1Q15075 1411 aa22.1■■□□□ 1.13
SEC13-203ENST00000383801 PRDM2Q13029 1718 aa22.1■■□□□ 1.13
SEC13-203ENST00000383801 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.13
SEC13-203ENST00000383801 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
SEC13-203ENST00000383801 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
SEC13-203ENST00000383801 SYNJ1O43426 1573 aa22■■□□□ 1.11
SEC13-203ENST00000383801 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
SEC13-203ENST00000383801 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
SEC13-203ENST00000383801 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
SEC13-203ENST00000383801 SOGA1O94964 1423 aa21.86■■□□□ 1.09
SEC13-203ENST00000383801 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
SEC13-203ENST00000383801 CUX1P39880 1505 aa21.83■■□□□ 1.08
SEC13-203ENST00000383801 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
SEC13-203ENST00000383801 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
SEC13-203ENST00000383801 PDS5BQ9NTI5 1447 aa21.71■■□□□ 1.07
SEC13-203ENST00000383801 KIF21BO75037 1637 aa21.7■■□□□ 1.06
SEC13-203ENST00000383801 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
SEC13-203ENST00000383801 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
SEC13-203ENST00000383801 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
SEC13-203ENST00000383801 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
SEC13-203ENST00000383801 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
SEC13-203ENST00000383801 NESP48681 1621 aa21.65■■□□□ 1.06
SEC13-203ENST00000383801 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
SEC13-203ENST00000383801 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
SEC13-203ENST00000383801 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
SEC13-203ENST00000383801 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
SEC13-203ENST00000383801 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
SEC13-203ENST00000383801 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.03
SEC13-203ENST00000383801 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
SEC13-203ENST00000383801 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
SEC13-203ENST00000383801 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
SEC13-203ENST00000383801 CUX2O14529 1486 aa21.47■■□□□ 1.03
SEC13-203ENST00000383801 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
SEC13-203ENST00000383801 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
SEC13-203ENST00000383801 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
SEC13-203ENST00000383801 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
SEC13-203ENST00000383801 IGF1RP08069 1367 aa21.41■■□□□ 1.02
SEC13-203ENST00000383801 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
SEC13-203ENST00000383801 MRC2Q9UBG0 1479 aa21.35■■□□□ 1.01
SEC13-203ENST00000383801 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
SEC13-203ENST00000383801 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
SEC13-203ENST00000383801 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
SEC13-203ENST00000383801 CLIP1P30622 1438 aa21.31■■□□□ 1
SEC13-203ENST00000383801 CUL7Q14999 1698 aa21.28■■□□□ 1
SEC13-203ENST00000383801 WDR62O43379 1518 aa21.25■□□□□ 0.99
SEC13-203ENST00000383801 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
SEC13-203ENST00000383801 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
SEC13-203ENST00000383801 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
SEC13-203ENST00000383801 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
SEC13-203ENST00000383801 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
SEC13-203ENST00000383801 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
SEC13-203ENST00000383801 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
SEC13-203ENST00000383801 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
SEC13-203ENST00000383801 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
SEC13-203ENST00000383801 GRIN2BQ13224 1484 aa21.03■□□□□ 0.96
SEC13-203ENST00000383801 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
SEC13-203ENST00000383801 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
SEC13-203ENST00000383801 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
SEC13-203ENST00000383801 APLP2Q06481 763 aa21.02■□□□□ 0.96
SEC13-203ENST00000383801 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
SEC13-203ENST00000383801 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
SEC13-203ENST00000383801 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
SEC13-203ENST00000383801 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.942e-7■■■■□ 26.2
SEC13-203ENST00000383801 ADAMTS12P58397 1594 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms