RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 NISCHQ9Y2I1 1504 aa36.14■■■■□ 3.38
SEC13-212ENST00000432213 ABCC9O60706 1549 aa32.53■■■□□ 2.8
SEC13-212ENST00000432213 CCDC180Q9P1Z9 1646 aa32.49■■■□□ 2.79
SEC13-212ENST00000432213 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
SEC13-212ENST00000432213 NACADO15069 1562 aa30.62■■■□□ 2.49
SEC13-212ENST00000432213 DNAJC5BQ9UF47 199 aa30.59■■■□□ 2.49
SEC13-212ENST00000432213 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
SEC13-212ENST00000432213 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
SEC13-212ENST00000432213 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
SEC13-212ENST00000432213 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
SEC13-212ENST00000432213 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
SEC13-212ENST00000432213 ZCCHC6Q5VYS8 1495 aaKnown RBP29.98■■■□□ 2.39
SEC13-212ENST00000432213 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
SEC13-212ENST00000432213 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
SEC13-212ENST00000432213 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
SEC13-212ENST00000432213 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
SEC13-212ENST00000432213 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
SEC13-212ENST00000432213 CECR2Q9BXF3 1484 aa29.24■■■□□ 2.27
SEC13-212ENST00000432213 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
SEC13-212ENST00000432213 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
SEC13-212ENST00000432213 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
SEC13-212ENST00000432213 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
SEC13-212ENST00000432213 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
SEC13-212ENST00000432213 NESP48681 1621 aa28.01■■■□□ 2.07
SEC13-212ENST00000432213 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
SEC13-212ENST00000432213 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
SEC13-212ENST00000432213 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
SEC13-212ENST00000432213 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
SEC13-212ENST00000432213 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
SEC13-212ENST00000432213 CUX2O14529 1486 aa27.93■■■□□ 2.06
SEC13-212ENST00000432213 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
SEC13-212ENST00000432213 THOC2Q8NI27 1593 aaKnown RBP27.75■■■□□ 2.03
SEC13-212ENST00000432213 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
SEC13-212ENST00000432213 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
SEC13-212ENST00000432213 WIZO95785 1651 aa27.65■■■□□ 2.02
SEC13-212ENST00000432213 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
SEC13-212ENST00000432213 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
SEC13-212ENST00000432213 WDR62O43379 1518 aa27.27■■□□□ 1.96
SEC13-212ENST00000432213 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
SEC13-212ENST00000432213 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
SEC13-212ENST00000432213 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
SEC13-212ENST00000432213 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
SEC13-212ENST00000432213 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
SEC13-212ENST00000432213 CFTRP13569 1480 aa27.11■■□□□ 1.93
SEC13-212ENST00000432213 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
SEC13-212ENST00000432213 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
SEC13-212ENST00000432213 CCDC88BA6NC98 1476 aa26.87■■□□□ 1.89
SEC13-212ENST00000432213 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
SEC13-212ENST00000432213 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
SEC13-212ENST00000432213 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
SEC13-212ENST00000432213 IFT140Q96RY7 1462 aa26.57■■□□□ 1.84
SEC13-212ENST00000432213 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
SEC13-212ENST00000432213 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
SEC13-212ENST00000432213 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
SEC13-212ENST00000432213 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
SEC13-212ENST00000432213 RIMBP3CA6NJZ7 1639 aa26.48■■□□□ 1.83
SEC13-212ENST00000432213 RIMBP3BA6NNM3 1639 aa26.48■■□□□ 1.83
SEC13-212ENST00000432213 RIMBP3Q9UFD9 1639 aa26.48■■□□□ 1.83
SEC13-212ENST00000432213 CHD1O14646 1710 aa26.44■■□□□ 1.82
SEC13-212ENST00000432213 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
SEC13-212ENST00000432213 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.812e-11■■■□□ 15.3
SEC13-212ENST00000432213 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
SEC13-212ENST00000432213 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
SEC13-212ENST00000432213 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
SEC13-212ENST00000432213 CUX1P39880 1505 aa26.24■■□□□ 1.79
SEC13-212ENST00000432213 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
SEC13-212ENST00000432213 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
SEC13-212ENST00000432213 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
SEC13-212ENST00000432213 SOGA1O94964 1423 aa26.15■■□□□ 1.78
SEC13-212ENST00000432213 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
SEC13-212ENST00000432213 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
SEC13-212ENST00000432213 FBLN2P98095 1184 aa26.06■■□□□ 1.76
SEC13-212ENST00000432213 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
SEC13-212ENST00000432213 CLASP1Q7Z460 1538 aa26.04■■□□□ 1.76
SEC13-212ENST00000432213 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
SEC13-212ENST00000432213 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
SEC13-212ENST00000432213 ABCA5Q8WWZ7 1642 aa25.95■■□□□ 1.74
SEC13-212ENST00000432213 GRIN2BQ13224 1484 aa25.94■■□□□ 1.74
SEC13-212ENST00000432213 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
SEC13-212ENST00000432213 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
SEC13-212ENST00000432213 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
SEC13-212ENST00000432213 GAPVD1Q14C86 1478 aa25.87■■□□□ 1.73
SEC13-212ENST00000432213 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
SEC13-212ENST00000432213 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
SEC13-212ENST00000432213 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
SEC13-212ENST00000432213 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
SEC13-212ENST00000432213 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
SEC13-212ENST00000432213 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
SEC13-212ENST00000432213 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
SEC13-212ENST00000432213 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
SEC13-212ENST00000432213 TRHP20396 242 aaPredicted RBP25.67■■□□□ 1.7
SEC13-212ENST00000432213 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
SEC13-212ENST00000432213 NUP160Q12769 1436 aa25.59■■□□□ 1.69
SEC13-212ENST00000432213 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
SEC13-212ENST00000432213 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
SEC13-212ENST00000432213 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
SEC13-212ENST00000432213 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
SEC13-212ENST00000432213 KIF13AQ9H1H9 1805 aa25.33■■□□□ 1.65
SEC13-212ENST00000432213 PRG4Q92954 1404 aaPredicted RBP25.3■■□□□ 1.64
SEC13-212ENST00000432213 JPH4Q96JJ6 628 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms