RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 AEBP2Q6ZN18 517 aaPredicted RBP14.4□□□□□ -0.1
SNHG1-204ENST00000537068 CHIC1Q5VXU3 224 aa13.63□□□□□ -0.23
SNHG1-204ENST00000537068 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
SNHG1-204ENST00000537068 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-204ENST00000537068 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
SNHG1-204ENST00000537068 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
SNHG1-204ENST00000537068 ABCC9O60706 1549 aa12.05□□□□□ -0.48
SNHG1-204ENST00000537068 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
SNHG1-204ENST00000537068 FOXD1Q16676 465 aa11.45□□□□□ -0.58
SNHG1-204ENST00000537068 NACADO15069 1562 aa11.42□□□□□ -0.58
SNHG1-204ENST00000537068 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
SNHG1-204ENST00000537068 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
SNHG1-204ENST00000537068 MYO15BQ96JP2 1530 aa11.29□□□□□ -0.6
SNHG1-204ENST00000537068 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
SNHG1-204ENST00000537068 BICRAQ9NZM4 1560 aa11.2□□□□□ -0.62
SNHG1-204ENST00000537068 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNHG1-204ENST00000537068 DCAF1Q9Y4B6 1507 aa11.1□□□□□ -0.63
SNHG1-204ENST00000537068 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
SNHG1-204ENST00000537068 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
SNHG1-204ENST00000537068 SHROOM4Q9ULL8 1493 aa11.03□□□□□ -0.64
SNHG1-204ENST00000537068 CC2D2AQ9P2K1 1620 aa10.93□□□□□ -0.66
SNHG1-204ENST00000537068 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
SNHG1-204ENST00000537068 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.67
SNHG1-204ENST00000537068 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
SNHG1-204ENST00000537068 MSH5O43196 834 aa10.76□□□□□ -0.69
SNHG1-204ENST00000537068 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
SNHG1-204ENST00000537068 PIAS4Q8N2W9 510 aaPredicted RBP10.62□□□□□ -0.71
SNHG1-204ENST00000537068 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
SNHG1-204ENST00000537068 ADRA2BP18089 450 aa10.57□□□□□ -0.72
SNHG1-204ENST00000537068 NCAPD3P42695 1498 aa10.55□□□□□ -0.72
SNHG1-204ENST00000537068 DNAJC5Q9H3Z4 198 aa10.53□□□□□ -0.72
SNHG1-204ENST00000537068 ATAD2BQ9ULI0 1458 aa10.48□□□□□ -0.73
SNHG1-204ENST00000537068 SMARCA4P51532 1647 aa10.47□□□□□ -0.73
SNHG1-204ENST00000537068 CUX2O14529 1486 aa10.46□□□□□ -0.74
SNHG1-204ENST00000537068 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
SNHG1-204ENST00000537068 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
SNHG1-204ENST00000537068 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
SNHG1-204ENST00000537068 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-204ENST00000537068 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
SNHG1-204ENST00000537068 NESP48681 1621 aa10.35□□□□□ -0.75
SNHG1-204ENST00000537068 BAZ1BQ9UIG0 1483 aaKnown RBP10.34□□□□□ -0.75
SNHG1-204ENST00000537068 LAMC3Q9Y6N6 1575 aa10.32□□□□□ -0.76
SNHG1-204ENST00000537068 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
SNHG1-204ENST00000537068 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
SNHG1-204ENST00000537068 KIF21AQ7Z4S6 1674 aa10.26□□□□□ -0.77
SNHG1-204ENST00000537068 PDS5BQ9NTI5 1447 aa10.21□□□□□ -0.78
SNHG1-204ENST00000537068 WIZO95785 1651 aa10.19□□□□□ -0.78
SNHG1-204ENST00000537068 CADPSQ9ULU8 1353 aa10.19□□□□□ -0.78
SNHG1-204ENST00000537068 WDR62O43379 1518 aa10.13□□□□□ -0.79
SNHG1-204ENST00000537068 MRC2Q9UBG0 1479 aa10.12□□□□□ -0.79
SNHG1-204ENST00000537068 CFTRP13569 1480 aa10.08□□□□□ -0.8
SNHG1-204ENST00000537068 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
SNHG1-204ENST00000537068 CEP164Q9UPV0 1460 aa10.06□□□□□ -0.8
SNHG1-204ENST00000537068 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
SNHG1-204ENST00000537068 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
SNHG1-204ENST00000537068 KCNA4P22459 653 aa10.04□□□□□ -0.8
SNHG1-204ENST00000537068 PRDM2Q13029 1718 aa10.04□□□□□ -0.8
SNHG1-204ENST00000537068 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
SNHG1-204ENST00000537068 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
SNHG1-204ENST00000537068 CCDC88BA6NC98 1476 aa9.93□□□□□ -0.82
SNHG1-204ENST00000537068 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
SNHG1-204ENST00000537068 IFT140Q96RY7 1462 aa9.88□□□□□ -0.83
SNHG1-204ENST00000537068 TOPBP1Q92547 1522 aa9.87□□□□□ -0.83
SNHG1-204ENST00000537068 ABCC8Q09428 1581 aa9.87□□□□□ -0.83
SNHG1-204ENST00000537068 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-204ENST00000537068 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
SNHG1-204ENST00000537068 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
SNHG1-204ENST00000537068 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
SNHG1-204ENST00000537068 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
SNHG1-204ENST00000537068 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
SNHG1-204ENST00000537068 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
SNHG1-204ENST00000537068 EIF4G3O43432 1585 aaKnown RBP9.82□□□□□ -0.84
SNHG1-204ENST00000537068 ARHGEF11O15085 1522 aa9.79□□□□□ -0.84
SNHG1-204ENST00000537068 CHD1O14646 1710 aa9.79□□□□□ -0.84
SNHG1-204ENST00000537068 EHMT2Q96KQ7 1210 aa9.77□□□□□ -0.85
SNHG1-204ENST00000537068 POLA1P09884 1462 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-204ENST00000537068 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
SNHG1-204ENST00000537068 AQRO60306 1485 aaKnown RBP eCLIP9.76□□□□□ -0.852e-14■■■■■ 45.6
SNHG1-204ENST00000537068 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-204ENST00000537068 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
SNHG1-204ENST00000537068 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
SNHG1-204ENST00000537068 RAD54L2Q9Y4B4 1467 aa9.72□□□□□ -0.85
SNHG1-204ENST00000537068 SOGA1O94964 1423 aa9.71□□□□□ -0.86
SNHG1-204ENST00000537068 CUX1P39880 1505 aa9.68□□□□□ -0.86
SNHG1-204ENST00000537068 FGD5Q6ZNL6 1462 aa9.68□□□□□ -0.86
SNHG1-204ENST00000537068 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
SNHG1-204ENST00000537068 TDRD9Q8NDG6 1382 aaKnown RBP9.68□□□□□ -0.86
SNHG1-204ENST00000537068 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
SNHG1-204ENST00000537068 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
SNHG1-204ENST00000537068 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-204ENST00000537068 SNAPC4Q5SXM2 1469 aa9.65□□□□□ -0.87
SNHG1-204ENST00000537068 FBLN2P98095 1184 aa9.64□□□□□ -0.87
SNHG1-204ENST00000537068 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
SNHG1-204ENST00000537068 GRIN2BQ13224 1484 aa9.63□□□□□ -0.87
SNHG1-204ENST00000537068 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
SNHG1-204ENST00000537068 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
SNHG1-204ENST00000537068 SYNJ2O15056 1496 aa9.61□□□□□ -0.87
SNHG1-204ENST00000537068 ABCA5Q8WWZ7 1642 aa9.6□□□□□ -0.87
SNHG1-204ENST00000537068 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
SNHG1-204ENST00000537068 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms