RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
SNHG1-212ENST00000539975 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
SNHG1-212ENST00000539975 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
SNHG1-212ENST00000539975 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
SNHG1-212ENST00000539975 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
SNHG1-212ENST00000539975 FOXD1Q16676 465 aa15.98■□□□□ 0.15
SNHG1-212ENST00000539975 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
SNHG1-212ENST00000539975 ADRA2BP18089 450 aa15.24■□□□□ 0.03
SNHG1-212ENST00000539975 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
SNHG1-212ENST00000539975 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
SNHG1-212ENST00000539975 MSH5O43196 834 aa14.88□□□□□ -0.03
SNHG1-212ENST00000539975 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
SNHG1-212ENST00000539975 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
SNHG1-212ENST00000539975 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
SNHG1-212ENST00000539975 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
SNHG1-212ENST00000539975 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
SNHG1-212ENST00000539975 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
SNHG1-212ENST00000539975 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
SNHG1-212ENST00000539975 KCNA4P22459 653 aa13.52□□□□□ -0.25
SNHG1-212ENST00000539975 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
SNHG1-212ENST00000539975 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
SNHG1-212ENST00000539975 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
SNHG1-212ENST00000539975 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
SNHG1-212ENST00000539975 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
SNHG1-212ENST00000539975 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
SNHG1-212ENST00000539975 ABCC9O60706 1549 aa13.02□□□□□ -0.33
SNHG1-212ENST00000539975 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
SNHG1-212ENST00000539975 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
SNHG1-212ENST00000539975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNHG1-212ENST00000539975 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
SNHG1-212ENST00000539975 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
SNHG1-212ENST00000539975 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
SNHG1-212ENST00000539975 NACADO15069 1562 aa12.57□□□□□ -0.4
SNHG1-212ENST00000539975 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
SNHG1-212ENST00000539975 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
SNHG1-212ENST00000539975 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
SNHG1-212ENST00000539975 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
SNHG1-212ENST00000539975 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
SNHG1-212ENST00000539975 DCAF1Q9Y4B6 1507 aa12.48□□□□□ -0.41
SNHG1-212ENST00000539975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
SNHG1-212ENST00000539975 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
SNHG1-212ENST00000539975 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
SNHG1-212ENST00000539975 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
SNHG1-212ENST00000539975 ZBTB22O15209 634 aa12.41□□□□□ -0.42
SNHG1-212ENST00000539975 APLP2Q06481 763 aa12.39□□□□□ -0.43
SNHG1-212ENST00000539975 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-212ENST00000539975 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
SNHG1-212ENST00000539975 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
SNHG1-212ENST00000539975 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNHG1-212ENST00000539975 SCRIBQ14160 1630 aa12.2□□□□□ -0.46
SNHG1-212ENST00000539975 CAPN15O75808 1086 aa12.19□□□□□ -0.46
SNHG1-212ENST00000539975 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
SNHG1-212ENST00000539975 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
SNHG1-212ENST00000539975 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-212ENST00000539975 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
SNHG1-212ENST00000539975 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.47
SNHG1-212ENST00000539975 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
SNHG1-212ENST00000539975 BICRAQ9NZM4 1560 aa12.05□□□□□ -0.48
SNHG1-212ENST00000539975 DSG3P32926 999 aa12.02□□□□□ -0.49
SNHG1-212ENST00000539975 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
SNHG1-212ENST00000539975 ABCB7O75027 752 aa11.89□□□□□ -0.51
SNHG1-212ENST00000539975 POLA2Q14181 598 aa11.88□□□□□ -0.51
SNHG1-212ENST00000539975 EIF4G1Q04637 1599 aaKnown RBP11.8□□□□□ -0.52
SNHG1-212ENST00000539975 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
SNHG1-212ENST00000539975 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
SNHG1-212ENST00000539975 CECR2Q9BXF3 1484 aa11.72□□□□□ -0.53
SNHG1-212ENST00000539975 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.53
SNHG1-212ENST00000539975 FBLN2P98095 1184 aa11.66□□□□□ -0.54
SNHG1-212ENST00000539975 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
SNHG1-212ENST00000539975 SMARCA2P51531 1590 aa11.63□□□□□ -0.55
SNHG1-212ENST00000539975 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
SNHG1-212ENST00000539975 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
SNHG1-212ENST00000539975 NCAPD3P42695 1498 aa11.6□□□□□ -0.55
SNHG1-212ENST00000539975 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
SNHG1-212ENST00000539975 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
SNHG1-212ENST00000539975 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
SNHG1-212ENST00000539975 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
SNHG1-212ENST00000539975 HMGXB3Q12766 1538 aa11.52□□□□□ -0.57
SNHG1-212ENST00000539975 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
SNHG1-212ENST00000539975 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
SNHG1-212ENST00000539975 WIZO95785 1651 aa11.47□□□□□ -0.57
SNHG1-212ENST00000539975 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
SNHG1-212ENST00000539975 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
SNHG1-212ENST00000539975 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
SNHG1-212ENST00000539975 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
SNHG1-212ENST00000539975 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.59
SNHG1-212ENST00000539975 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
SNHG1-212ENST00000539975 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
SNHG1-212ENST00000539975 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
SNHG1-212ENST00000539975 CCDC88BA6NC98 1476 aa11.29□□□□□ -0.6
SNHG1-212ENST00000539975 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
SNHG1-212ENST00000539975 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
SNHG1-212ENST00000539975 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
SNHG1-212ENST00000539975 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
SNHG1-212ENST00000539975 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
SNHG1-212ENST00000539975 NESP48681 1621 aa11.24□□□□□ -0.61
SNHG1-212ENST00000539975 CFTRP13569 1480 aa11.22□□□□□ -0.61
SNHG1-212ENST00000539975 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
SNHG1-212ENST00000539975 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
SNHG1-212ENST00000539975 CEP164Q9UPV0 1460 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms