RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
SNHG1-206ENST00000537925 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
SNHG1-206ENST00000537925 ABCC9O60706 1549 aa23.96■■□□□ 1.43
SNHG1-206ENST00000537925 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.3
SNHG1-206ENST00000537925 NACADO15069 1562 aa23.13■■□□□ 1.29
SNHG1-206ENST00000537925 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
SNHG1-206ENST00000537925 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
SNHG1-206ENST00000537925 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
SNHG1-206ENST00000537925 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
SNHG1-206ENST00000537925 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
SNHG1-206ENST00000537925 DNAJC5BQ9UF47 199 aa22.69■■□□□ 1.22
SNHG1-206ENST00000537925 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
SNHG1-206ENST00000537925 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
SNHG1-206ENST00000537925 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNHG1-206ENST00000537925 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
SNHG1-206ENST00000537925 EIF4G1Q04637 1599 aaKnown RBP21.84■■□□□ 1.09
SNHG1-206ENST00000537925 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
SNHG1-206ENST00000537925 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
SNHG1-206ENST00000537925 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
SNHG1-206ENST00000537925 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
SNHG1-206ENST00000537925 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
SNHG1-206ENST00000537925 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
SNHG1-206ENST00000537925 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
SNHG1-206ENST00000537925 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
SNHG1-206ENST00000537925 PEG3Q9GZU2 1588 aa21.33■■□□□ 1
SNHG1-206ENST00000537925 NCAPD3P42695 1498 aa21.33■■□□□ 1
SNHG1-206ENST00000537925 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
SNHG1-206ENST00000537925 WIZO95785 1651 aa21.18■□□□□ 0.98
SNHG1-206ENST00000537925 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
SNHG1-206ENST00000537925 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
SNHG1-206ENST00000537925 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
SNHG1-206ENST00000537925 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
SNHG1-206ENST00000537925 NESP48681 1621 aa20.78■□□□□ 0.92
SNHG1-206ENST00000537925 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
SNHG1-206ENST00000537925 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
SNHG1-206ENST00000537925 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
SNHG1-206ENST00000537925 KIF21AQ7Z4S6 1674 aa20.62■□□□□ 0.89
SNHG1-206ENST00000537925 CFTRP13569 1480 aa20.6■□□□□ 0.89
SNHG1-206ENST00000537925 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
SNHG1-206ENST00000537925 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
SNHG1-206ENST00000537925 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.89
SNHG1-206ENST00000537925 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
SNHG1-206ENST00000537925 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
SNHG1-206ENST00000537925 CUX2O14529 1486 aa20.44■□□□□ 0.86
SNHG1-206ENST00000537925 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
SNHG1-206ENST00000537925 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
SNHG1-206ENST00000537925 WDR62O43379 1518 aa20.34■□□□□ 0.85
SNHG1-206ENST00000537925 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
SNHG1-206ENST00000537925 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
SNHG1-206ENST00000537925 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
SNHG1-206ENST00000537925 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
SNHG1-206ENST00000537925 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
SNHG1-206ENST00000537925 CUX1P39880 1505 aa20.04■□□□□ 0.8
SNHG1-206ENST00000537925 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
SNHG1-206ENST00000537925 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
SNHG1-206ENST00000537925 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
SNHG1-206ENST00000537925 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
SNHG1-206ENST00000537925 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
SNHG1-206ENST00000537925 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
SNHG1-206ENST00000537925 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
SNHG1-206ENST00000537925 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
SNHG1-206ENST00000537925 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
SNHG1-206ENST00000537925 SOGA1O94964 1423 aa19.88■□□□□ 0.77
SNHG1-206ENST00000537925 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
SNHG1-206ENST00000537925 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
SNHG1-206ENST00000537925 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
SNHG1-206ENST00000537925 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.762e-14■■■■■ 45.6
SNHG1-206ENST00000537925 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.75
SNHG1-206ENST00000537925 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
SNHG1-206ENST00000537925 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
SNHG1-206ENST00000537925 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
SNHG1-206ENST00000537925 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
SNHG1-206ENST00000537925 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
SNHG1-206ENST00000537925 CHD1O14646 1710 aa19.65■□□□□ 0.74
SNHG1-206ENST00000537925 SNAPC4Q5SXM2 1469 aa19.61■□□□□ 0.73
SNHG1-206ENST00000537925 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
SNHG1-206ENST00000537925 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
SNHG1-206ENST00000537925 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
SNHG1-206ENST00000537925 SYNJ2O15056 1496 aa19.52■□□□□ 0.71
SNHG1-206ENST00000537925 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
SNHG1-206ENST00000537925 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
SNHG1-206ENST00000537925 FBLN2P98095 1184 aa19.47■□□□□ 0.71
SNHG1-206ENST00000537925 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
SNHG1-206ENST00000537925 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
SNHG1-206ENST00000537925 CUL7Q14999 1698 aa19.42■□□□□ 0.7
SNHG1-206ENST00000537925 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
SNHG1-206ENST00000537925 IGF1RP08069 1367 aa19.4■□□□□ 0.7
SNHG1-206ENST00000537925 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
SNHG1-206ENST00000537925 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
SNHG1-206ENST00000537925 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
SNHG1-206ENST00000537925 NUP160Q12769 1436 aa19.31■□□□□ 0.68
SNHG1-206ENST00000537925 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
SNHG1-206ENST00000537925 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
SNHG1-206ENST00000537925 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
SNHG1-206ENST00000537925 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
SNHG1-206ENST00000537925 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
SNHG1-206ENST00000537925 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.68
SNHG1-206ENST00000537925 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
SNHG1-206ENST00000537925 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
SNHG1-206ENST00000537925 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms