RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
SNHG1-208ENST00000538266 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
SNHG1-208ENST00000538266 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.13
SNHG1-208ENST00000538266 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
SNHG1-208ENST00000538266 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
SNHG1-208ENST00000538266 FOXD1Q16676 465 aa13□□□□□ -0.33
SNHG1-208ENST00000538266 ADRA2BP18089 450 aa12.59□□□□□ -0.39
SNHG1-208ENST00000538266 PPP6R1Q9UPN7 881 aa12.59□□□□□ -0.39
SNHG1-208ENST00000538266 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
SNHG1-208ENST00000538266 MSH5O43196 834 aa11.95□□□□□ -0.5
SNHG1-208ENST00000538266 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
SNHG1-208ENST00000538266 SCAF1Q9H7N4 1312 aaKnown RBP11.52□□□□□ -0.57
SNHG1-208ENST00000538266 KCNA4P22459 653 aa11.46□□□□□ -0.57
SNHG1-208ENST00000538266 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-208ENST00000538266 NCBP3Q53F19 620 aaKnown RBP11.38□□□□□ -0.59
SNHG1-208ENST00000538266 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
SNHG1-208ENST00000538266 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
SNHG1-208ENST00000538266 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
SNHG1-208ENST00000538266 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
SNHG1-208ENST00000538266 HOXD11P31277 338 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-208ENST00000538266 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
SNHG1-208ENST00000538266 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
SNHG1-208ENST00000538266 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
SNHG1-208ENST00000538266 POTEDQ86YR6 584 aa10.76□□□□□ -0.69
SNHG1-208ENST00000538266 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
SNHG1-208ENST00000538266 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
SNHG1-208ENST00000538266 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
SNHG1-208ENST00000538266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.73
SNHG1-208ENST00000538266 ZBTB22O15209 634 aa10.51□□□□□ -0.73
SNHG1-208ENST00000538266 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
SNHG1-208ENST00000538266 MYCNP04198 464 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-208ENST00000538266 U3KPZ7 1027 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-208ENST00000538266 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
SNHG1-208ENST00000538266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-208ENST00000538266 HNRNPUL2Q1KMD3 747 aaKnown RBP10.22□□□□□ -0.77
SNHG1-208ENST00000538266 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-208ENST00000538266 ATXN8OSP0DMR3 200 aa10.14□□□□□ -0.79
SNHG1-208ENST00000538266 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
SNHG1-208ENST00000538266 APLP2Q06481 763 aa10.09□□□□□ -0.79
SNHG1-208ENST00000538266 NISCHQ9Y2I1 1504 aa10.07□□□□□ -0.8
SNHG1-208ENST00000538266 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-208ENST00000538266 SPINK5Q9NQ38 1064 aaPredicted RBP10.02□□□□□ -0.81
SNHG1-208ENST00000538266 CAPN15O75808 1086 aa10□□□□□ -0.81
SNHG1-208ENST00000538266 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-208ENST00000538266 CACNB1Q02641 598 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-208ENST00000538266 ZNF219Q9P2Y4 722 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-208ENST00000538266 POLA2Q14181 598 aa9.83□□□□□ -0.84
SNHG1-208ENST00000538266 ABCB7O75027 752 aa9.79□□□□□ -0.84
SNHG1-208ENST00000538266 DSG3P32926 999 aa9.79□□□□□ -0.84
SNHG1-208ENST00000538266 FBLN2P98095 1184 aa9.64□□□□□ -0.87
SNHG1-208ENST00000538266 ZBTB12Q9Y330 459 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-208ENST00000538266 MKRN4PQ13434 485 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-208ENST00000538266 FKBP8Q14318 412 aa9.53□□□□□ -0.88
SNHG1-208ENST00000538266 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
SNHG1-208ENST00000538266 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
SNHG1-208ENST00000538266 ZNF692Q9BU19 519 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-208ENST00000538266 SPDYE2BA6NHP3 402 aa9.38□□□□□ -0.91
SNHG1-208ENST00000538266 SPDYE6P0CI01 402 aa9.38□□□□□ -0.91
SNHG1-208ENST00000538266 SPDYE2Q495Y8 402 aa9.38□□□□□ -0.91
SNHG1-208ENST00000538266 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
SNHG1-208ENST00000538266 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
SNHG1-208ENST00000538266 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNHG1-208ENST00000538266 PROM2Q8N271 834 aa9.25□□□□□ -0.93
SNHG1-208ENST00000538266 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
SNHG1-208ENST00000538266 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
SNHG1-208ENST00000538266 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-208ENST00000538266 STAG3Q9UJ98 1225 aa9.12□□□□□ -0.95
SNHG1-208ENST00000538266 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-208ENST00000538266 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
SNHG1-208ENST00000538266 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-208ENST00000538266 PRR29P0C7W0 189 aa9.02□□□□□ -0.97
SNHG1-208ENST00000538266 PITPNM1O00562 1244 aa9.01□□□□□ -0.97
SNHG1-208ENST00000538266 MIER1Q8N108 512 aa9.01□□□□□ -0.97
SNHG1-208ENST00000538266 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
SNHG1-208ENST00000538266 PLEKHG5O94827 1062 aa8.94□□□□□ -0.98
SNHG1-208ENST00000538266 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-208ENST00000538266 CCDC180Q9P1Z9 1646 aa8.93□□□□□ -0.98
SNHG1-208ENST00000538266 KLHL34Q8N239 644 aa8.92□□□□□ -0.98
SNHG1-208ENST00000538266 CHRDL2Q6WN34 429 aa8.91□□□□□ -0.98
SNHG1-208ENST00000538266 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
SNHG1-208ENST00000538266 ZBTB47Q9UFB7 747 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-208ENST00000538266 FXR2P51116 673 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNHG1-208ENST00000538266 CHADLQ6NUI6 762 aa8.84□□□□□ -0.99
SNHG1-208ENST00000538266 PRKAR2AP13861 404 aaKnown RBP8.82□□□□□ -1
SNHG1-208ENST00000538266 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
SNHG1-208ENST00000538266 SPOCK2Q92563 424 aa8.81□□□□□ -1
SNHG1-208ENST00000538266 AMER1Q5JTC6 1135 aaPredicted RBP8.79□□□□□ -1
SNHG1-208ENST00000538266 MNX1P50219 401 aaPredicted RBP8.78□□□□□ -1
SNHG1-208ENST00000538266 RTN4Q9NQC3 1192 aaKnown RBP8.78□□□□□ -1
SNHG1-208ENST00000538266 NPM1P06748 294 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNHG1-208ENST00000538266 FARP1Q9Y4F1 1045 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-208ENST00000538266 NUBP1P53384 320 aa8.71□□□□□ -1.02
SNHG1-208ENST00000538266 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-208ENST00000538266 DCAF8Q5TAQ9 597 aa8.69□□□□□ -1.02
SNHG1-208ENST00000538266 RASEFQ8IZ41 740 aa8.66□□□□□ -1.02
SNHG1-208ENST00000538266 PKD2Q13563 968 aa8.65□□□□□ -1.02
SNHG1-208ENST00000538266 GSE1Q14687 1217 aa8.65□□□□□ -1.02
SNHG1-208ENST00000538266 FAM212AQ96EL1 285 aa8.64□□□□□ -1.03
SNHG1-208ENST00000538266 TSPYL2Q9H2G4 693 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-208ENST00000538266 ABCC9O60706 1549 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms