RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 AEBP2Q6ZN18 517 aaPredicted RBP5.77□□□□□ -1.49
SNORD28-201ENST00000384706 CHIC1Q5VXU3 224 aa5.33□□□□□ -1.56
SNORD28-201ENST00000384706 POTEDQ86YR6 584 aa5.23□□□□□ -1.57
SNORD28-201ENST00000384706 SENP3Q9H4L4 574 aaPredicted RBP4.96□□□□□ -1.62
SNORD28-201ENST00000384706 PHF23Q9BUL5 403 aaPredicted RBP4.83□□□□□ -1.64
SNORD28-201ENST00000384706 FOXD1Q16676 465 aa4.7□□□□□ -1.66
SNORD28-201ENST00000384706 MSH5O43196 834 aa4.55□□□□□ -1.68
SNORD28-201ENST00000384706 PIAS4Q8N2W9 510 aaPredicted RBP4.22□□□□□ -1.73
SNORD28-201ENST00000384706 CACNB1Q02641 598 aaPredicted RBP4.14□□□□□ -1.75
SNORD28-201ENST00000384706 PPP6R1Q9UPN7 881 aa4.04□□□□□ -1.76
SNORD28-201ENST00000384706 POTEHQ6S545 545 aa3.99□□□□□ -1.77
SNORD28-201ENST00000384706 ADRA2BP18089 450 aa3.96□□□□□ -1.78
SNORD28-201ENST00000384706 PLPPR3Q6T4P5 718 aa3.9□□□□□ -1.79
SNORD28-201ENST00000384706 DMRT2Q9Y5R5 561 aa3.88□□□□□ -1.79
SNORD28-201ENST00000384706 RNF39Q9H2S5 420 aa3.86□□□□□ -1.79
SNORD28-201ENST00000384706 MAPK8IP2Q13387 824 aaPredicted RBP3.79□□□□□ -1.8
SNORD28-201ENST00000384706 C1QBPQ07021 282 aaKnown RBP3.77□□□□□ -1.81
SNORD28-201ENST00000384706 DCAF8L1A6NGE4 600 aa3.62□□□□□ -1.83
SNORD28-201ENST00000384706 SCAF1Q9H7N4 1312 aaKnown RBP3.62□□□□□ -1.83
SNORD28-201ENST00000384706 DNAJC5BQ9UF47 199 aa3.6□□□□□ -1.83
SNORD28-201ENST00000384706 HOXD11P31277 338 aaPredicted RBP3.58□□□□□ -1.84
SNORD28-201ENST00000384706 SP7Q8TDD2 431 aaPredicted RBP3.53□□□□□ -1.84
SNORD28-201ENST00000384706 DSG3P32926 999 aa3.46□□□□□ -1.86
SNORD28-201ENST00000384706 PPP4R3CPQ6ZMV5 832 aa3.42□□□□□ -1.86
SNORD28-201ENST00000384706 PLSCR2Q9NRY7 297 aa3.4□□□□□ -1.87
SNORD28-201ENST00000384706 RNF216Q9NWF9 866 aaPredicted RBP3.4□□□□□ -1.87
SNORD28-201ENST00000384706 CHRDL2Q6WN34 429 aa3.39□□□□□ -1.87
SNORD28-201ENST00000384706 CNKSR2Q8WXI2 1034 aa3.36□□□□□ -1.87
SNORD28-201ENST00000384706 SPINK5Q9NQ38 1064 aaPredicted RBP3.33□□□□□ -1.88
SNORD28-201ENST00000384706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNORD28-201ENST00000384706 CAPN15O75808 1086 aa3.29□□□□□ -1.88
SNORD28-201ENST00000384706 LHX8Q68G74 356 aa3.29□□□□□ -1.88
SNORD28-201ENST00000384706 RBM42Q9BTD8 480 aaKnown RBP3.28□□□□□ -1.88
SNORD28-201ENST00000384706 NCBP3Q53F19 620 aaKnown RBP3.27□□□□□ -1.89
SNORD28-201ENST00000384706 U3KPZ7 1027 aaPredicted RBP3.26□□□□□ -1.89
SNORD28-201ENST00000384706 HAX1O00165 279 aa3.24□□□□□ -1.89
SNORD28-201ENST00000384706 EVX2Q03828 476 aa3.23□□□□□ -1.89
SNORD28-201ENST00000384706 NPM3O75607 178 aaKnown RBP3.22□□□□□ -1.89
SNORD28-201ENST00000384706 PIP4P2Q8N4L2 257 aa3.22□□□□□ -1.89
SNORD28-201ENST00000384706 ABCB7O75027 752 aa3.18□□□□□ -1.9
SNORD28-201ENST00000384706 FXR2P51116 673 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNORD28-201ENST00000384706 ZNF219Q9P2Y4 722 aaPredicted RBP3.15□□□□□ -1.91
SNORD28-201ENST00000384706 TRHP20396 242 aaPredicted RBP3.13□□□□□ -1.91
SNORD28-201ENST00000384706 AKT1S1Q96B36 256 aa3.13□□□□□ -1.91
SNORD28-201ENST00000384706 PCDH10Q9P2E7 1040 aa3.13□□□□□ -1.91
SNORD28-201ENST00000384706 POTEMA6NI47 508 aa3.12□□□□□ -1.91
SNORD28-201ENST00000384706 GABBR2O75899 941 aa3.12□□□□□ -1.91
SNORD28-201ENST00000384706 KCNA4P22459 653 aa3.12□□□□□ -1.91
SNORD28-201ENST00000384706 POTEGQ6S5H5 508 aa3.09□□□□□ -1.91
SNORD28-201ENST00000384706 REM2Q8IYK8 340 aaPredicted RBP3.09□□□□□ -1.91
SNORD28-201ENST00000384706 SLC4A2P04920 1241 aa3.08□□□□□ -1.92
SNORD28-201ENST00000384706 POTEIP0CG38 1075 aa3.08□□□□□ -1.92
SNORD28-201ENST00000384706 C19orf67A6NJJ6 358 aa3.07□□□□□ -1.92
SNORD28-201ENST00000384706 APLP2Q06481 763 aa3.07□□□□□ -1.92
SNORD28-201ENST00000384706 PITPNM1O00562 1244 aa3.06□□□□□ -1.92
SNORD28-201ENST00000384706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.04□□□□□ -1.92
SNORD28-201ENST00000384706 HNRNPUL2Q1KMD3 747 aaKnown RBP3.04□□□□□ -1.92
SNORD28-201ENST00000384706 OTUD5Q96G74 571 aa3.03□□□□□ -1.92
SNORD28-201ENST00000384706 SAMD1Q6SPF0 538 aaPredicted RBP3.02□□□□□ -1.93
SNORD28-201ENST00000384706 POLA2Q14181 598 aa2.98□□□□□ -1.93
SNORD28-201ENST00000384706 LCE2DQ5TA82 110 aaPredicted RBP2.98□□□□□ -1.93
SNORD28-201ENST00000384706 MYCNP04198 464 aaPredicted RBP2.97□□□□□ -1.93
SNORD28-201ENST00000384706 POTEB2H3BUK9 544 aa2.96□□□□□ -1.94
SNORD28-201ENST00000384706 PRKAR2AP13861 404 aaKnown RBP2.96□□□□□ -1.94
SNORD28-201ENST00000384706 CLCN6P51797 869 aa2.94□□□□□ -1.94
SNORD28-201ENST00000384706 SLC4A1APQ9BWU0 796 aaKnown RBP2.94□□□□□ -1.94
SNORD28-201ENST00000384706 ATF5Q9Y2D1 282 aaPredicted RBP2.93□□□□□ -1.94
SNORD28-201ENST00000384706 FOXD4L1Q9NU39 408 aa2.91□□□□□ -1.94
SNORD28-201ENST00000384706 OSCARQ8IYS5 282 aa2.89□□□□□ -1.95
SNORD28-201ENST00000384706 DCBLD2Q96PD2 775 aa2.88□□□□□ -1.95
SNORD28-201ENST00000384706 ZBTB12Q9Y330 459 aaPredicted RBP2.88□□□□□ -1.95
SNORD28-201ENST00000384706 CDAN1Q8IWY9 1227 aa2.87□□□□□ -1.95
SNORD28-201ENST00000384706 MMRN1Q13201 1228 aa2.86□□□□□ -1.95
SNORD28-201ENST00000384706 ZBTB22O15209 634 aa2.85□□□□□ -1.95
SNORD28-201ENST00000384706 POTEJP0CG39 1038 aa2.85□□□□□ -1.95
SNORD28-201ENST00000384706 CD44P16070 742 aaKnown RBP2.83□□□□□ -1.96
SNORD28-201ENST00000384706 SPNS2Q8IVW8 549 aa2.83□□□□□ -1.96
SNORD28-201ENST00000384706 FAM163AQ96GL9 167 aaPredicted RBP2.83□□□□□ -1.96
SNORD28-201ENST00000384706 ATXN8OSP0DMR3 200 aa2.82□□□□□ -1.96
SNORD28-201ENST00000384706 SPDYE1Q8NFV5 336 aaPredicted RBP2.82□□□□□ -1.96
SNORD28-201ENST00000384706 FBLN2P98095 1184 aa2.81□□□□□ -1.96
SNORD28-201ENST00000384706 CHADLQ6NUI6 762 aa2.81□□□□□ -1.96
SNORD28-201ENST00000384706 ZNF579Q8NAF0 562 aaKnown RBP2.81□□□□□ -1.96
SNORD28-201ENST00000384706 SPDYE2BA6NHP3 402 aa2.8□□□□□ -1.96
SNORD28-201ENST00000384706 SPDYE6P0CI01 402 aa2.8□□□□□ -1.96
SNORD28-201ENST00000384706 SPDYE2Q495Y8 402 aa2.8□□□□□ -1.96
SNORD28-201ENST00000384706 CLEC11AQ9Y240 323 aa2.8□□□□□ -1.96
SNORD28-201ENST00000384706 MAMSTRQ6ZN01 415 aa2.79□□□□□ -1.96
SNORD28-201ENST00000384706 PELP1Q8IZL8 1130 aaKnown RBP2.79□□□□□ -1.96
SNORD28-201ENST00000384706 ZNF692Q9BU19 519 aaPredicted RBP2.79□□□□□ -1.96
SNORD28-201ENST00000384706 GALR2O43603 387 aaPredicted RBP2.78□□□□□ -1.96
SNORD28-201ENST00000384706 MKRN4PQ13434 485 aaPredicted RBP2.77□□□□□ -1.97
SNORD28-201ENST00000384706 FARP1Q9Y4F1 1045 aaPredicted RBP2.75□□□□□ -1.97
SNORD28-201ENST00000384706 PRR29P0C7W0 189 aa2.74□□□□□ -1.97
SNORD28-201ENST00000384706 PABPN1Q86U42 306 aaKnown RBP eCLIP2.74□□□□□ -1.97
SNORD28-201ENST00000384706 METRNQ9UJH8 293 aa2.74□□□□□ -1.97
SNORD28-201ENST00000384706 SSUH2Q9Y2M2 353 aa2.74□□□□□ -1.97
SNORD28-201ENST00000384706 C7P10643 843 aa2.73□□□□□ -1.97
SNORD28-201ENST00000384706 SLC39A7Q92504 469 aa2.73□□□□□ -1.97
SNORD28-201ENST00000384706 SCUBE2Q9NQ36 999 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms