RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
GPM6B-209ENST00000493085 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
GPM6B-209ENST00000493085 ABCC9O60706 1549 aa22.29■■□□□ 1.16
GPM6B-209ENST00000493085 RB1CC1Q8TDY2 1594 aa21.4■■□□□ 1.02
GPM6B-209ENST00000493085 NACADO15069 1562 aa21.36■■□□□ 1.01
GPM6B-209ENST00000493085 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
GPM6B-209ENST00000493085 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
GPM6B-209ENST00000493085 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
GPM6B-209ENST00000493085 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
GPM6B-209ENST00000493085 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
GPM6B-209ENST00000493085 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
GPM6B-209ENST00000493085 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
GPM6B-209ENST00000493085 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
GPM6B-209ENST00000493085 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
GPM6B-209ENST00000493085 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
GPM6B-209ENST00000493085 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
GPM6B-209ENST00000493085 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
GPM6B-209ENST00000493085 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
GPM6B-209ENST00000493085 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
GPM6B-209ENST00000493085 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
GPM6B-209ENST00000493085 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
GPM6B-209ENST00000493085 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
GPM6B-209ENST00000493085 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
GPM6B-209ENST00000493085 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
GPM6B-209ENST00000493085 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
GPM6B-209ENST00000493085 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
GPM6B-209ENST00000493085 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
GPM6B-209ENST00000493085 WIZO95785 1651 aa19.43■□□□□ 0.7
GPM6B-209ENST00000493085 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
GPM6B-209ENST00000493085 NESP48681 1621 aa19.25■□□□□ 0.67
GPM6B-209ENST00000493085 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
GPM6B-209ENST00000493085 TOP2AP11388 1531 aaKnown RBP19.21■□□□□ 0.67
GPM6B-209ENST00000493085 LAMC3Q9Y6N6 1575 aa19.2■□□□□ 0.66
GPM6B-209ENST00000493085 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
GPM6B-209ENST00000493085 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
GPM6B-209ENST00000493085 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
GPM6B-209ENST00000493085 CUX2O14529 1486 aa19.04■□□□□ 0.64
GPM6B-209ENST00000493085 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
GPM6B-209ENST00000493085 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
GPM6B-209ENST00000493085 CFTRP13569 1480 aa18.98■□□□□ 0.63
GPM6B-209ENST00000493085 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
GPM6B-209ENST00000493085 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
GPM6B-209ENST00000493085 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
GPM6B-209ENST00000493085 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
GPM6B-209ENST00000493085 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
GPM6B-209ENST00000493085 WDR62O43379 1518 aa18.82■□□□□ 0.6
GPM6B-209ENST00000493085 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
GPM6B-209ENST00000493085 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
GPM6B-209ENST00000493085 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
GPM6B-209ENST00000493085 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
GPM6B-209ENST00000493085 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
GPM6B-209ENST00000493085 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
GPM6B-209ENST00000493085 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
GPM6B-209ENST00000493085 CUX1P39880 1505 aa18.43■□□□□ 0.54
GPM6B-209ENST00000493085 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
GPM6B-209ENST00000493085 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
GPM6B-209ENST00000493085 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
GPM6B-209ENST00000493085 SOGA1O94964 1423 aa18.36■□□□□ 0.53
GPM6B-209ENST00000493085 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
GPM6B-209ENST00000493085 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
GPM6B-209ENST00000493085 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.52
GPM6B-209ENST00000493085 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
GPM6B-209ENST00000493085 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.51
GPM6B-209ENST00000493085 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
GPM6B-209ENST00000493085 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
GPM6B-209ENST00000493085 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
GPM6B-209ENST00000493085 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
GPM6B-209ENST00000493085 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
GPM6B-209ENST00000493085 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
GPM6B-209ENST00000493085 CHD1O14646 1710 aa18.15■□□□□ 0.5
GPM6B-209ENST00000493085 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
GPM6B-209ENST00000493085 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
GPM6B-209ENST00000493085 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
GPM6B-209ENST00000493085 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
GPM6B-209ENST00000493085 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
GPM6B-209ENST00000493085 FBLN2P98095 1184 aa18.13■□□□□ 0.49
GPM6B-209ENST00000493085 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
GPM6B-209ENST00000493085 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
GPM6B-209ENST00000493085 SYNJ2O15056 1496 aa18.05■□□□□ 0.48
GPM6B-209ENST00000493085 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
GPM6B-209ENST00000493085 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
GPM6B-209ENST00000493085 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
GPM6B-209ENST00000493085 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
GPM6B-209ENST00000493085 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
GPM6B-209ENST00000493085 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
GPM6B-209ENST00000493085 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
GPM6B-209ENST00000493085 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
GPM6B-209ENST00000493085 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
GPM6B-209ENST00000493085 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
GPM6B-209ENST00000493085 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
GPM6B-209ENST00000493085 NUP160Q12769 1436 aa17.84■□□□□ 0.45
GPM6B-209ENST00000493085 CEP170Q5SW79 1584 aa17.83■□□□□ 0.45
GPM6B-209ENST00000493085 IGF1RP08069 1367 aa17.83■□□□□ 0.45
GPM6B-209ENST00000493085 CUL7Q14999 1698 aa17.81■□□□□ 0.44
GPM6B-209ENST00000493085 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
GPM6B-209ENST00000493085 CYB5RLQ6IPT4 315 aa17.79■□□□□ 0.44
GPM6B-209ENST00000493085 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
GPM6B-209ENST00000493085 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
GPM6B-209ENST00000493085 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
GPM6B-209ENST00000493085 ERCC6L2Q5T890 1561 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms