RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
SNHG1-205ENST00000537869 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
SNHG1-205ENST00000537869 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
SNHG1-205ENST00000537869 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
SNHG1-205ENST00000537869 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
SNHG1-205ENST00000537869 FOXD1Q16676 465 aa19.64■□□□□ 0.73
SNHG1-205ENST00000537869 ADRA2BP18089 450 aa19.41■□□□□ 0.7
SNHG1-205ENST00000537869 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
SNHG1-205ENST00000537869 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
SNHG1-205ENST00000537869 KCNA4P22459 653 aa18.53■□□□□ 0.56
SNHG1-205ENST00000537869 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
SNHG1-205ENST00000537869 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
SNHG1-205ENST00000537869 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
SNHG1-205ENST00000537869 MSH5O43196 834 aa17.81■□□□□ 0.44
SNHG1-205ENST00000537869 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
SNHG1-205ENST00000537869 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
SNHG1-205ENST00000537869 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
SNHG1-205ENST00000537869 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
SNHG1-205ENST00000537869 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
SNHG1-205ENST00000537869 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
SNHG1-205ENST00000537869 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
SNHG1-205ENST00000537869 ZBTB22O15209 634 aa17.08■□□□□ 0.32
SNHG1-205ENST00000537869 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
SNHG1-205ENST00000537869 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
SNHG1-205ENST00000537869 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
SNHG1-205ENST00000537869 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
SNHG1-205ENST00000537869 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
SNHG1-205ENST00000537869 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
SNHG1-205ENST00000537869 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
SNHG1-205ENST00000537869 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
SNHG1-205ENST00000537869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNHG1-205ENST00000537869 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
SNHG1-205ENST00000537869 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
SNHG1-205ENST00000537869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
SNHG1-205ENST00000537869 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
SNHG1-205ENST00000537869 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
SNHG1-205ENST00000537869 FKBP8Q14318 412 aa15.71■□□□□ 0.11
SNHG1-205ENST00000537869 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
SNHG1-205ENST00000537869 APLP2Q06481 763 aa15.51■□□□□ 0.07
SNHG1-205ENST00000537869 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
SNHG1-205ENST00000537869 RTN4Q9NQC3 1192 aaKnown RBP15.35■□□□□ 0.05
SNHG1-205ENST00000537869 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
SNHG1-205ENST00000537869 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
SNHG1-205ENST00000537869 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
SNHG1-205ENST00000537869 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
SNHG1-205ENST00000537869 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
SNHG1-205ENST00000537869 CAPN15O75808 1086 aa15.21■□□□□ 0.03
SNHG1-205ENST00000537869 POLA2Q14181 598 aa15.19■□□□□ 0.02
SNHG1-205ENST00000537869 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
SNHG1-205ENST00000537869 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
SNHG1-205ENST00000537869 FBLN2P98095 1184 aa15.1■□□□□ 0.01
SNHG1-205ENST00000537869 ABCB7O75027 752 aa15□□□□□ -0.01
SNHG1-205ENST00000537869 PROM2Q8N271 834 aa14.95□□□□□ -0.02
SNHG1-205ENST00000537869 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
SNHG1-205ENST00000537869 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
SNHG1-205ENST00000537869 DSG3P32926 999 aa14.83□□□□□ -0.04
SNHG1-205ENST00000537869 SLC24A1O60721 1099 aa14.76□□□□□ -0.05
SNHG1-205ENST00000537869 VASPP50552 380 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-205ENST00000537869 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
SNHG1-205ENST00000537869 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
SNHG1-205ENST00000537869 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
SNHG1-205ENST00000537869 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
SNHG1-205ENST00000537869 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
SNHG1-205ENST00000537869 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
SNHG1-205ENST00000537869 CACNB1Q02641 598 aaPredicted RBP14.54□□□□□ -0.08
SNHG1-205ENST00000537869 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
SNHG1-205ENST00000537869 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
SNHG1-205ENST00000537869 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
SNHG1-205ENST00000537869 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
SNHG1-205ENST00000537869 PKD2Q13563 968 aa14.37□□□□□ -0.11
SNHG1-205ENST00000537869 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
SNHG1-205ENST00000537869 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
SNHG1-205ENST00000537869 MIER1Q8N108 512 aa14.3□□□□□ -0.12
SNHG1-205ENST00000537869 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
SNHG1-205ENST00000537869 ECM2O94769 699 aaPredicted RBP14.15□□□□□ -0.14
SNHG1-205ENST00000537869 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
SNHG1-205ENST00000537869 PLEKHG5O94827 1062 aa14.1□□□□□ -0.15
SNHG1-205ENST00000537869 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-205ENST00000537869 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
SNHG1-205ENST00000537869 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
SNHG1-205ENST00000537869 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
SNHG1-205ENST00000537869 RGL2O15211 777 aa14.01□□□□□ -0.17
SNHG1-205ENST00000537869 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
SNHG1-205ENST00000537869 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNHG1-205ENST00000537869 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
SNHG1-205ENST00000537869 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
SNHG1-205ENST00000537869 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
SNHG1-205ENST00000537869 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
SNHG1-205ENST00000537869 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
SNHG1-205ENST00000537869 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
SNHG1-205ENST00000537869 NUBP1P53384 320 aa13.87□□□□□ -0.19
SNHG1-205ENST00000537869 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
SNHG1-205ENST00000537869 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
SNHG1-205ENST00000537869 GSE1Q14687 1217 aa13.83□□□□□ -0.2
SNHG1-205ENST00000537869 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
SNHG1-205ENST00000537869 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
SNHG1-205ENST00000537869 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
SNHG1-205ENST00000537869 DCAF8Q5TAQ9 597 aa13.8□□□□□ -0.2
SNHG1-205ENST00000537869 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
SNHG1-205ENST00000537869 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms