Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.37■■■□□ 2.61
ZFYVE28Q9HCC9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.35■■■□□ 2.61
ZFYVE28Q9HCC9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZFYVE28Q9HCC9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZFYVE28Q9HCC9 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.33■■■□□ 2.61
ZFYVE28Q9HCC9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.33■■■□□ 2.61
ZFYVE28Q9HCC9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZFYVE28Q9HCC9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
ZFYVE28Q9HCC9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZFYVE28Q9HCC9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ZFYVE28Q9HCC9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
ZFYVE28Q9HCC9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZFYVE28Q9HCC9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.29■■■□□ 2.6
ZFYVE28Q9HCC9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ZFYVE28Q9HCC9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
ZFYVE28Q9HCC9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ZFYVE28Q9HCC9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZFYVE28Q9HCC9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.26■■■□□ 2.6
ZFYVE28Q9HCC9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
ZFYVE28Q9HCC9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZFYVE28Q9HCC9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZFYVE28Q9HCC9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZFYVE28Q9HCC9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ZFYVE28Q9HCC9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ZFYVE28Q9HCC9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ZFYVE28Q9HCC9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
ZFYVE28Q9HCC9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.21■■■□□ 2.59
ZFYVE28Q9HCC9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZFYVE28Q9HCC9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZFYVE28Q9HCC9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
ZFYVE28Q9HCC9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
ZFYVE28Q9HCC9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ZFYVE28Q9HCC9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ZFYVE28Q9HCC9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZFYVE28Q9HCC9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.16■■■□□ 2.58
ZFYVE28Q9HCC9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZFYVE28Q9HCC9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.15■■■□□ 2.58
ZFYVE28Q9HCC9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZFYVE28Q9HCC9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZFYVE28Q9HCC9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ZFYVE28Q9HCC9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ZFYVE28Q9HCC9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.13■■■□□ 2.57
ZFYVE28Q9HCC9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.13■■■□□ 2.57
ZFYVE28Q9HCC9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ZFYVE28Q9HCC9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.12■■■□□ 2.57
ZFYVE28Q9HCC9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ZFYVE28Q9HCC9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.1■■■□□ 2.57
ZFYVE28Q9HCC9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ZFYVE28Q9HCC9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.08■■■□□ 2.57
ZFYVE28Q9HCC9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ZFYVE28Q9HCC9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
ZFYVE28Q9HCC9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ZFYVE28Q9HCC9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ZFYVE28Q9HCC9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.07■■■□□ 2.56
ZFYVE28Q9HCC9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.07■■■□□ 2.56
ZFYVE28Q9HCC9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZFYVE28Q9HCC9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZFYVE28Q9HCC9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZFYVE28Q9HCC9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.04■■■□□ 2.56
ZFYVE28Q9HCC9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.04■■■□□ 2.56
ZFYVE28Q9HCC9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ZFYVE28Q9HCC9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ZFYVE28Q9HCC9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ZFYVE28Q9HCC9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L13-201ENST00000554103 1267 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L15-201ENST00000611059 1267 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L23-201ENST00000615195 1269 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L24-201ENST00000617576 1269 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L22-201ENST00000618238 1269 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L20-201ENST00000619712 1269 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L21-201ENST00000622058 1269 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L10-201ENST00000622460 1267 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 DUX4L25-201ENST00000624915 1269 ntBASIC31.02■■■□□ 2.56
ZFYVE28Q9HCC9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.01■■■□□ 2.55
ZFYVE28Q9HCC9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ZFYVE28Q9HCC9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31■■■□□ 2.55
ZFYVE28Q9HCC9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ZFYVE28Q9HCC9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ZFYVE28Q9HCC9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ZFYVE28Q9HCC9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.95■■■□□ 2.55
ZFYVE28Q9HCC9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ZFYVE28Q9HCC9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
ZFYVE28Q9HCC9 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.95■■■□□ 2.55
ZFYVE28Q9HCC9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ZFYVE28Q9HCC9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.93■■■□□ 2.54
ZFYVE28Q9HCC9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
ZFYVE28Q9HCC9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.92■■■□□ 2.54
ZFYVE28Q9HCC9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
ZFYVE28Q9HCC9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.9■■■□□ 2.54
ZFYVE28Q9HCC9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ZFYVE28Q9HCC9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ZFYVE28Q9HCC9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.89■■■□□ 2.54
ZFYVE28Q9HCC9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.89■■■□□ 2.54
ZFYVE28Q9HCC9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
ZFYVE28Q9HCC9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
ZFYVE28Q9HCC9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ZFYVE28Q9HCC9 RARRES2P2-201ENST00000394842 485 ntBASIC30.87■■■□□ 2.53
ZFYVE28Q9HCC9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.87■■■□□ 2.53
ZFYVE28Q9HCC9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms