Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
LRRC3BQ96PB8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
LRRC3BQ96PB8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.86■■■□□ 2.05
LRRC3BQ96PB8 MIR6090-201ENST00000622481 60 ntBASIC27.86■■■□□ 2.05
LRRC3BQ96PB8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
LRRC3BQ96PB8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.86■■■□□ 2.05
LRRC3BQ96PB8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
LRRC3BQ96PB8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.85■■■□□ 2.05
LRRC3BQ96PB8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.84■■■□□ 2.05
LRRC3BQ96PB8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
LRRC3BQ96PB8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
LRRC3BQ96PB8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
LRRC3BQ96PB8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
LRRC3BQ96PB8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LRRC3BQ96PB8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
LRRC3BQ96PB8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
LRRC3BQ96PB8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.79■■■□□ 2.04
LRRC3BQ96PB8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
LRRC3BQ96PB8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
LRRC3BQ96PB8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LRRC3BQ96PB8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.77■■■□□ 2.04
LRRC3BQ96PB8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
LRRC3BQ96PB8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.76■■■□□ 2.03
LRRC3BQ96PB8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LRRC3BQ96PB8 AC108673.1-201ENST00000510422 1159 ntBASIC27.75■■■□□ 2.03
LRRC3BQ96PB8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
LRRC3BQ96PB8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
LRRC3BQ96PB8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LRRC3BQ96PB8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LRRC3BQ96PB8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LRRC3BQ96PB8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LRRC3BQ96PB8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LRRC3BQ96PB8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.73■■■□□ 2.03
LRRC3BQ96PB8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
LRRC3BQ96PB8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LRRC3BQ96PB8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.7■■■□□ 2.02
LRRC3BQ96PB8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
LRRC3BQ96PB8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
LRRC3BQ96PB8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
LRRC3BQ96PB8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
LRRC3BQ96PB8 AC120057.4-201ENST00000624722 1615 ntBASIC27.69■■■□□ 2.02
LRRC3BQ96PB8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.68■■■□□ 2.02
LRRC3BQ96PB8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
LRRC3BQ96PB8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
LRRC3BQ96PB8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
LRRC3BQ96PB8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.66■■■□□ 2.02
LRRC3BQ96PB8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LRRC3BQ96PB8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.65■■■□□ 2.02
LRRC3BQ96PB8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LRRC3BQ96PB8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.63■■■□□ 2.01
LRRC3BQ96PB8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.63■■■□□ 2.01
LRRC3BQ96PB8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.62■■■□□ 2.01
LRRC3BQ96PB8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
LRRC3BQ96PB8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.62■■■□□ 2.01
LRRC3BQ96PB8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LRRC3BQ96PB8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
LRRC3BQ96PB8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
LRRC3BQ96PB8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.6■■■□□ 2.01
LRRC3BQ96PB8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
LRRC3BQ96PB8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.59■■■□□ 2.01
LRRC3BQ96PB8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LRRC3BQ96PB8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LRRC3BQ96PB8 MIR639-201ENST00000384974 98 ntBASIC27.58■■■□□ 2.01
LRRC3BQ96PB8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LRRC3BQ96PB8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.57■■■□□ 2
LRRC3BQ96PB8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.57■■■□□ 2
LRRC3BQ96PB8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.57■■■□□ 2
LRRC3BQ96PB8 MIR4449-201ENST00000578365 66 ntBASIC27.57■■■□□ 2
LRRC3BQ96PB8 MIR3648-2-201ENST00000581792 180 ntBASIC27.57■■■□□ 2
LRRC3BQ96PB8 MIR3648-1-201ENST00000615959 180 ntBASIC27.57■■■□□ 2
LRRC3BQ96PB8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.56■■■□□ 2
LRRC3BQ96PB8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
LRRC3BQ96PB8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
LRRC3BQ96PB8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
LRRC3BQ96PB8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.55■■■□□ 2
LRRC3BQ96PB8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
LRRC3BQ96PB8 AC016575.1-201ENST00000607026 382 ntBASIC27.54■■■□□ 2
LRRC3BQ96PB8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.53■■■□□ 2
LRRC3BQ96PB8 DUX4L11-201ENST00000611504 1267 ntBASIC27.52■■■□□ 2
LRRC3BQ96PB8 DUX4L12-201ENST00000614593 1267 ntBASIC27.52■■■□□ 2
LRRC3BQ96PB8 DUX4L14-201ENST00000621227 1267 ntBASIC27.52■■■□□ 2
LRRC3BQ96PB8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.52■■■□□ 2
LRRC3BQ96PB8 LINC01971-201ENST00000617888 1048 ntBASIC27.5■■□□□ 1.99
LRRC3BQ96PB8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
LRRC3BQ96PB8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.49■■□□□ 1.99
LRRC3BQ96PB8 CR559946.2-201ENST00000623684 991 ntBASIC27.49■■□□□ 1.99
LRRC3BQ96PB8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.49■■□□□ 1.99
LRRC3BQ96PB8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
LRRC3BQ96PB8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
LRRC3BQ96PB8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
LRRC3BQ96PB8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
LRRC3BQ96PB8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.45■■□□□ 1.99
LRRC3BQ96PB8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
LRRC3BQ96PB8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
LRRC3BQ96PB8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
LRRC3BQ96PB8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.44■■□□□ 1.98
LRRC3BQ96PB8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
LRRC3BQ96PB8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
LRRC3BQ96PB8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
LRRC3BQ96PB8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms