Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLC44A5Q8NCS7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
SLC44A5Q8NCS7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.71■■■□□ 2.67
SLC44A5Q8NCS7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SLC44A5Q8NCS7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
SLC44A5Q8NCS7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SLC44A5Q8NCS7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.66■■■□□ 2.66
SLC44A5Q8NCS7 ABHD17AP4-201ENST00000411545 909 ntBASIC31.66■■■□□ 2.66
SLC44A5Q8NCS7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.66■■■□□ 2.66
SLC44A5Q8NCS7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SLC44A5Q8NCS7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SLC44A5Q8NCS7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SLC44A5Q8NCS7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.64■■■□□ 2.66
SLC44A5Q8NCS7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SLC44A5Q8NCS7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLC44A5Q8NCS7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLC44A5Q8NCS7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
SLC44A5Q8NCS7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
SLC44A5Q8NCS7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SLC44A5Q8NCS7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLC44A5Q8NCS7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SLC44A5Q8NCS7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SLC44A5Q8NCS7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.62■■■□□ 2.65
SLC44A5Q8NCS7 AL161658.1-201ENST00000623641 1967 ntBASIC31.61■■■□□ 2.65
SLC44A5Q8NCS7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SLC44A5Q8NCS7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.6■■■□□ 2.65
SLC44A5Q8NCS7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.59■■■□□ 2.65
SLC44A5Q8NCS7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SLC44A5Q8NCS7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.57■■■□□ 2.64
SLC44A5Q8NCS7 MIR6090-201ENST00000622481 60 ntBASIC31.57■■■□□ 2.64
SLC44A5Q8NCS7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SLC44A5Q8NCS7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SLC44A5Q8NCS7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SLC44A5Q8NCS7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.54■■■□□ 2.64
SLC44A5Q8NCS7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SLC44A5Q8NCS7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SLC44A5Q8NCS7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SLC44A5Q8NCS7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.53■■■□□ 2.64
SLC44A5Q8NCS7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.53■■■□□ 2.64
SLC44A5Q8NCS7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SLC44A5Q8NCS7 MIR7108-201ENST00000614319 87 ntBASIC31.51■■■□□ 2.63
SLC44A5Q8NCS7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SLC44A5Q8NCS7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.5■■■□□ 2.63
SLC44A5Q8NCS7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SLC44A5Q8NCS7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC44A5Q8NCS7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
SLC44A5Q8NCS7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SLC44A5Q8NCS7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.48■■■□□ 2.63
SLC44A5Q8NCS7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SLC44A5Q8NCS7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
SLC44A5Q8NCS7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SLC44A5Q8NCS7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SLC44A5Q8NCS7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.46■■■□□ 2.63
SLC44A5Q8NCS7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.46■■■□□ 2.63
SLC44A5Q8NCS7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SLC44A5Q8NCS7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
SLC44A5Q8NCS7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SLC44A5Q8NCS7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
SLC44A5Q8NCS7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SLC44A5Q8NCS7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
SLC44A5Q8NCS7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 AC108673.1-201ENST00000510422 1159 ntBASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.44■■■□□ 2.62
SLC44A5Q8NCS7 ZNRF2P2-203ENST00000454624 420 ntBASIC31.43■■■□□ 2.62
SLC44A5Q8NCS7 AC021231.2-201ENST00000594613 730 ntBASIC31.43■■■□□ 2.62
SLC44A5Q8NCS7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC44A5Q8NCS7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SLC44A5Q8NCS7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.41■■■□□ 2.62
SLC44A5Q8NCS7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
SLC44A5Q8NCS7 DUX4L29-201ENST00000425409 679 ntBASIC31.4■■■□□ 2.62
SLC44A5Q8NCS7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC44A5Q8NCS7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC44A5Q8NCS7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.38■■■□□ 2.61
SLC44A5Q8NCS7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLC44A5Q8NCS7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC44A5Q8NCS7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SLC44A5Q8NCS7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC44A5Q8NCS7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SLC44A5Q8NCS7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLC44A5Q8NCS7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.36■■■□□ 2.61
SLC44A5Q8NCS7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.36■■■□□ 2.61
SLC44A5Q8NCS7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SLC44A5Q8NCS7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
SLC44A5Q8NCS7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLC44A5Q8NCS7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLC44A5Q8NCS7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SLC44A5Q8NCS7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SLC44A5Q8NCS7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
SLC44A5Q8NCS7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms