Protein–RNA interactions for Protein: Q8N878

FRMD1, FERM domain-containing protein 1, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1Q8N878 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FRMD1Q8N878 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FRMD1Q8N878 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.95■■□□□ 1.9
FRMD1Q8N878 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
FRMD1Q8N878 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
FRMD1Q8N878 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.94■■□□□ 1.9
FRMD1Q8N878 MIR4449-201ENST00000578365 66 ntBASIC26.94■■□□□ 1.9
FRMD1Q8N878 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
FRMD1Q8N878 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.93■■□□□ 1.9
FRMD1Q8N878 AC108673.1-201ENST00000510422 1159 ntBASIC26.93■■□□□ 1.9
FRMD1Q8N878 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
FRMD1Q8N878 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
FRMD1Q8N878 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
FRMD1Q8N878 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
FRMD1Q8N878 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
FRMD1Q8N878 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.92■■□□□ 1.9
FRMD1Q8N878 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
FRMD1Q8N878 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.9■■□□□ 1.9
FRMD1Q8N878 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
FRMD1Q8N878 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.9■■□□□ 1.9
FRMD1Q8N878 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.89■■□□□ 1.9
FRMD1Q8N878 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.89■■□□□ 1.9
FRMD1Q8N878 AC016575.1-201ENST00000607026 382 ntBASIC26.89■■□□□ 1.9
FRMD1Q8N878 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
FRMD1Q8N878 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.88■■□□□ 1.89
FRMD1Q8N878 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.88■■□□□ 1.89
FRMD1Q8N878 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
FRMD1Q8N878 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
FRMD1Q8N878 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
FRMD1Q8N878 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
FRMD1Q8N878 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
FRMD1Q8N878 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.87■■□□□ 1.89
FRMD1Q8N878 MIR3648-2-201ENST00000581792 180 ntBASIC26.87■■□□□ 1.89
FRMD1Q8N878 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
FRMD1Q8N878 MIR3648-1-201ENST00000615959 180 ntBASIC26.87■■□□□ 1.89
FRMD1Q8N878 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.87■■□□□ 1.89
FRMD1Q8N878 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.87■■□□□ 1.89
FRMD1Q8N878 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
FRMD1Q8N878 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FRMD1Q8N878 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
FRMD1Q8N878 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
FRMD1Q8N878 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
FRMD1Q8N878 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
FRMD1Q8N878 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
FRMD1Q8N878 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
FRMD1Q8N878 DUX4L11-201ENST00000611504 1267 ntBASIC26.8■■□□□ 1.88
FRMD1Q8N878 DUX4L12-201ENST00000614593 1267 ntBASIC26.8■■□□□ 1.88
FRMD1Q8N878 DUX4L14-201ENST00000621227 1267 ntBASIC26.8■■□□□ 1.88
FRMD1Q8N878 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
FRMD1Q8N878 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
FRMD1Q8N878 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
FRMD1Q8N878 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.79■■□□□ 1.88
FRMD1Q8N878 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.79■■□□□ 1.88
FRMD1Q8N878 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
FRMD1Q8N878 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FRMD1Q8N878 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
FRMD1Q8N878 CR559946.2-201ENST00000623684 991 ntBASIC26.78■■□□□ 1.88
FRMD1Q8N878 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
FRMD1Q8N878 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.77■■□□□ 1.88
FRMD1Q8N878 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.77■■□□□ 1.88
FRMD1Q8N878 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.77■■□□□ 1.88
FRMD1Q8N878 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
FRMD1Q8N878 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FRMD1Q8N878 LINC01971-201ENST00000617888 1048 ntBASIC26.74■■□□□ 1.87
FRMD1Q8N878 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FRMD1Q8N878 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.72■■□□□ 1.87
FRMD1Q8N878 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
FRMD1Q8N878 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
FRMD1Q8N878 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FRMD1Q8N878 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FRMD1Q8N878 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
FRMD1Q8N878 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
FRMD1Q8N878 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
FRMD1Q8N878 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.7■■□□□ 1.86
FRMD1Q8N878 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.69■■□□□ 1.86
FRMD1Q8N878 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.69■■□□□ 1.86
FRMD1Q8N878 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.68■■□□□ 1.86
FRMD1Q8N878 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.68■■□□□ 1.86
FRMD1Q8N878 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
FRMD1Q8N878 HSD17B1P1-201ENST00000590052 955 ntBASIC26.66■■□□□ 1.86
FRMD1Q8N878 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
FRMD1Q8N878 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FRMD1Q8N878 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
FRMD1Q8N878 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
FRMD1Q8N878 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
FRMD1Q8N878 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.64■■□□□ 1.86
FRMD1Q8N878 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
FRMD1Q8N878 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
FRMD1Q8N878 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
FRMD1Q8N878 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FRMD1Q8N878 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
FRMD1Q8N878 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FRMD1Q8N878 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
FRMD1Q8N878 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
FRMD1Q8N878 AC120057.4-201ENST00000624722 1615 ntBASIC26.59■■□□□ 1.85
FRMD1Q8N878 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FRMD1Q8N878 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FRMD1Q8N878 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
FRMD1Q8N878 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
FRMD1Q8N878 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms