Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SIX5Q8N196 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SIX5Q8N196 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.75■■■□□ 2.03
SIX5Q8N196 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.75■■■□□ 2.03
SIX5Q8N196 LINC01971-201ENST00000617888 1048 ntBASIC27.75■■■□□ 2.03
SIX5Q8N196 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SIX5Q8N196 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SIX5Q8N196 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
SIX5Q8N196 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.72■■■□□ 2.03
SIX5Q8N196 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SIX5Q8N196 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SIX5Q8N196 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.69■■■□□ 2.02
SIX5Q8N196 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SIX5Q8N196 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
SIX5Q8N196 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
SIX5Q8N196 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SIX5Q8N196 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.67■■■□□ 2.02
SIX5Q8N196 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.67■■■□□ 2.02
SIX5Q8N196 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
SIX5Q8N196 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SIX5Q8N196 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SIX5Q8N196 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SIX5Q8N196 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SIX5Q8N196 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SIX5Q8N196 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SIX5Q8N196 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SIX5Q8N196 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.61■■■□□ 2.01
SIX5Q8N196 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SIX5Q8N196 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SIX5Q8N196 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.6■■■□□ 2.01
SIX5Q8N196 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.6■■■□□ 2.01
SIX5Q8N196 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SIX5Q8N196 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SIX5Q8N196 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SIX5Q8N196 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.57■■■□□ 2
SIX5Q8N196 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SIX5Q8N196 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.54■■■□□ 2
SIX5Q8N196 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.54■■■□□ 2
SIX5Q8N196 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SIX5Q8N196 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SIX5Q8N196 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.53■■■□□ 2
SIX5Q8N196 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.52■■■□□ 2
SIX5Q8N196 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.52■■■□□ 2
SIX5Q8N196 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SIX5Q8N196 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.51■■□□□ 1.99
SIX5Q8N196 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.51■■□□□ 1.99
SIX5Q8N196 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SIX5Q8N196 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SIX5Q8N196 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SIX5Q8N196 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SIX5Q8N196 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SIX5Q8N196 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SIX5Q8N196 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SIX5Q8N196 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SIX5Q8N196 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.47■■□□□ 1.99
SIX5Q8N196 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SIX5Q8N196 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.46■■□□□ 1.99
SIX5Q8N196 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SIX5Q8N196 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.44■■□□□ 1.98
SIX5Q8N196 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SIX5Q8N196 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SIX5Q8N196 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.43■■□□□ 1.98
SIX5Q8N196 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SIX5Q8N196 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SIX5Q8N196 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.41■■□□□ 1.98
SIX5Q8N196 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SIX5Q8N196 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L13-201ENST00000554103 1267 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L15-201ENST00000611059 1267 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L23-201ENST00000615195 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L24-201ENST00000617576 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L22-201ENST00000618238 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L20-201ENST00000619712 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L21-201ENST00000622058 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L10-201ENST00000622460 1267 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 DUX4L25-201ENST00000624915 1269 ntBASIC27.41■■□□□ 1.98
SIX5Q8N196 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
SIX5Q8N196 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SIX5Q8N196 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.37■■□□□ 1.97
SIX5Q8N196 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.37■■□□□ 1.97
SIX5Q8N196 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.37■■□□□ 1.97
SIX5Q8N196 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SIX5Q8N196 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.35■■□□□ 1.97
SIX5Q8N196 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SIX5Q8N196 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SIX5Q8N196 RARRES2P2-201ENST00000394842 485 ntBASIC27.34■■□□□ 1.97
SIX5Q8N196 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.34■■□□□ 1.97
SIX5Q8N196 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.33■■□□□ 1.97
SIX5Q8N196 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.33■■□□□ 1.97
SIX5Q8N196 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SIX5Q8N196 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.31■■□□□ 1.96
SIX5Q8N196 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.31■■□□□ 1.96
SIX5Q8N196 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SIX5Q8N196 ABHD17AP5-201ENST00000580133 923 ntBASIC27.3■■□□□ 1.96
SIX5Q8N196 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SIX5Q8N196 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SIX5Q8N196 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms