Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
COL23A1Q86Y22 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC34.62■■■■□ 3.13
COL23A1Q86Y22 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
COL23A1Q86Y22 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
COL23A1Q86Y22 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL23A1Q86Y22 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
COL23A1Q86Y22 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
COL23A1Q86Y22 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC34.59■■■■□ 3.13
COL23A1Q86Y22 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL23A1Q86Y22 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
COL23A1Q86Y22 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
COL23A1Q86Y22 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
COL23A1Q86Y22 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC34.57■■■■□ 3.12
COL23A1Q86Y22 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC34.56■■■■□ 3.12
COL23A1Q86Y22 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC34.55■■■■□ 3.12
COL23A1Q86Y22 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC34.54■■■■□ 3.12
COL23A1Q86Y22 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL23A1Q86Y22 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL23A1Q86Y22 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
COL23A1Q86Y22 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
COL23A1Q86Y22 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC34.51■■■■□ 3.11
COL23A1Q86Y22 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.5■■■■□ 3.11
COL23A1Q86Y22 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
COL23A1Q86Y22 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
COL23A1Q86Y22 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
COL23A1Q86Y22 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC34.48■■■■□ 3.11
COL23A1Q86Y22 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
COL23A1Q86Y22 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC34.48■■■■□ 3.11
COL23A1Q86Y22 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
COL23A1Q86Y22 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC34.46■■■■□ 3.11
COL23A1Q86Y22 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
COL23A1Q86Y22 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
COL23A1Q86Y22 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
COL23A1Q86Y22 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
COL23A1Q86Y22 METRNL-202ENST00000570778 967 ntTSL 5 BASIC34.41■■■■□ 3.1
COL23A1Q86Y22 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
COL23A1Q86Y22 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC34.4■■■■□ 3.1
COL23A1Q86Y22 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.39■■■■□ 3.1
COL23A1Q86Y22 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.38■■■■□ 3.09
COL23A1Q86Y22 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
COL23A1Q86Y22 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
COL23A1Q86Y22 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
COL23A1Q86Y22 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC34.37■■■■□ 3.09
COL23A1Q86Y22 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC34.36■■■■□ 3.09
COL23A1Q86Y22 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC34.36■■■■□ 3.09
COL23A1Q86Y22 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC34.36■■■■□ 3.09
COL23A1Q86Y22 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
COL23A1Q86Y22 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
COL23A1Q86Y22 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
COL23A1Q86Y22 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.35■■■■□ 3.09
COL23A1Q86Y22 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
COL23A1Q86Y22 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
COL23A1Q86Y22 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
COL23A1Q86Y22 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.28■■■■□ 3.08
COL23A1Q86Y22 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
COL23A1Q86Y22 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC34.27■■■■□ 3.08
COL23A1Q86Y22 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC34.27■■■■□ 3.08
COL23A1Q86Y22 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
COL23A1Q86Y22 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L13-201ENST00000554103 1267 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L15-201ENST00000611059 1267 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L23-201ENST00000615195 1269 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L24-201ENST00000617576 1269 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L22-201ENST00000618238 1269 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L20-201ENST00000619712 1269 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L21-201ENST00000622058 1269 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L10-201ENST00000622460 1267 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 DUX4L25-201ENST00000624915 1269 ntBASIC34.26■■■■□ 3.08
COL23A1Q86Y22 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC34.25■■■■□ 3.07
COL23A1Q86Y22 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
COL23A1Q86Y22 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
COL23A1Q86Y22 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC34.22■■■■□ 3.07
COL23A1Q86Y22 RARRES2P2-201ENST00000394842 485 ntBASIC34.22■■■■□ 3.07
COL23A1Q86Y22 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.22■■■■□ 3.07
COL23A1Q86Y22 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
COL23A1Q86Y22 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
COL23A1Q86Y22 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
COL23A1Q86Y22 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.19■■■■□ 3.06
COL23A1Q86Y22 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.19■■■■□ 3.06
COL23A1Q86Y22 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
COL23A1Q86Y22 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
COL23A1Q86Y22 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.18■■■■□ 3.06
COL23A1Q86Y22 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
COL23A1Q86Y22 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
COL23A1Q86Y22 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.16■■■■□ 3.06
COL23A1Q86Y22 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC34.15■■■■□ 3.06
COL23A1Q86Y22 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.15■■■■□ 3.06
COL23A1Q86Y22 ABHD17AP5-201ENST00000580133 923 ntBASIC34.15■■■■□ 3.06
COL23A1Q86Y22 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.14■■■■□ 3.06
COL23A1Q86Y22 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC34.14■■■■□ 3.06
COL23A1Q86Y22 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC34.12■■■■□ 3.05
COL23A1Q86Y22 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
COL23A1Q86Y22 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.11■■■■□ 3.05
COL23A1Q86Y22 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
COL23A1Q86Y22 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.09■■■■□ 3.05
COL23A1Q86Y22 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
COL23A1Q86Y22 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.09■■■■□ 3.05
COL23A1Q86Y22 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.09■■■■□ 3.05
COL23A1Q86Y22 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
COL23A1Q86Y22 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms