Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RTN4RL1Q86UN2 MIR6090-201ENST00000622481 60 ntBASIC29.34■■■□□ 2.29
RTN4RL1Q86UN2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.34■■■□□ 2.29
RTN4RL1Q86UN2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
RTN4RL1Q86UN2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
RTN4RL1Q86UN2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.33■■■□□ 2.29
RTN4RL1Q86UN2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
RTN4RL1Q86UN2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RTN4RL1Q86UN2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RTN4RL1Q86UN2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RTN4RL1Q86UN2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RTN4RL1Q86UN2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
RTN4RL1Q86UN2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RTN4RL1Q86UN2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RTN4RL1Q86UN2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.29■■■□□ 2.28
RTN4RL1Q86UN2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
RTN4RL1Q86UN2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RTN4RL1Q86UN2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.27■■■□□ 2.28
RTN4RL1Q86UN2 AC108673.1-201ENST00000510422 1159 ntBASIC29.26■■■□□ 2.27
RTN4RL1Q86UN2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
RTN4RL1Q86UN2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.25■■■□□ 2.27
RTN4RL1Q86UN2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RTN4RL1Q86UN2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RTN4RL1Q86UN2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RTN4RL1Q86UN2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RTN4RL1Q86UN2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
RTN4RL1Q86UN2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RTN4RL1Q86UN2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.22■■■□□ 2.27
RTN4RL1Q86UN2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RTN4RL1Q86UN2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RTN4RL1Q86UN2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RTN4RL1Q86UN2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RTN4RL1Q86UN2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
RTN4RL1Q86UN2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.19■■■□□ 2.26
RTN4RL1Q86UN2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RTN4RL1Q86UN2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RTN4RL1Q86UN2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.18■■■□□ 2.26
RTN4RL1Q86UN2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RTN4RL1Q86UN2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RTN4RL1Q86UN2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.15■■■□□ 2.26
RTN4RL1Q86UN2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
RTN4RL1Q86UN2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RTN4RL1Q86UN2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
RTN4RL1Q86UN2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.11■■■□□ 2.25
RTN4RL1Q86UN2 AC120057.4-201ENST00000624722 1615 ntBASIC29.11■■■□□ 2.25
RTN4RL1Q86UN2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RTN4RL1Q86UN2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.1■■■□□ 2.25
RTN4RL1Q86UN2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.09■■■□□ 2.25
RTN4RL1Q86UN2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RTN4RL1Q86UN2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
RTN4RL1Q86UN2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.09■■■□□ 2.25
RTN4RL1Q86UN2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.09■■■□□ 2.25
RTN4RL1Q86UN2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.09■■■□□ 2.25
RTN4RL1Q86UN2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
RTN4RL1Q86UN2 MIR639-201ENST00000384974 98 ntBASIC29.08■■■□□ 2.25
RTN4RL1Q86UN2 MIR4449-201ENST00000578365 66 ntBASIC29.08■■■□□ 2.25
RTN4RL1Q86UN2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RTN4RL1Q86UN2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.07■■■□□ 2.24
RTN4RL1Q86UN2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.06■■■□□ 2.24
RTN4RL1Q86UN2 MIR3648-2-201ENST00000581792 180 ntBASIC29.06■■■□□ 2.24
RTN4RL1Q86UN2 MIR3648-1-201ENST00000615959 180 ntBASIC29.06■■■□□ 2.24
RTN4RL1Q86UN2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
RTN4RL1Q86UN2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
RTN4RL1Q86UN2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
RTN4RL1Q86UN2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.04■■■□□ 2.24
RTN4RL1Q86UN2 AC016575.1-201ENST00000607026 382 ntBASIC29.04■■■□□ 2.24
RTN4RL1Q86UN2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.04■■■□□ 2.24
RTN4RL1Q86UN2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
RTN4RL1Q86UN2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RTN4RL1Q86UN2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RTN4RL1Q86UN2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.24
RTN4RL1Q86UN2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
RTN4RL1Q86UN2 DUX4L11-201ENST00000611504 1267 ntBASIC29.01■■■□□ 2.23
RTN4RL1Q86UN2 DUX4L12-201ENST00000614593 1267 ntBASIC29.01■■■□□ 2.23
RTN4RL1Q86UN2 DUX4L14-201ENST00000621227 1267 ntBASIC29.01■■■□□ 2.23
RTN4RL1Q86UN2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
RTN4RL1Q86UN2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
RTN4RL1Q86UN2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RTN4RL1Q86UN2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.99■■■□□ 2.23
RTN4RL1Q86UN2 LINC01971-201ENST00000617888 1048 ntBASIC28.99■■■□□ 2.23
RTN4RL1Q86UN2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RTN4RL1Q86UN2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RTN4RL1Q86UN2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.97■■■□□ 2.23
RTN4RL1Q86UN2 CR559946.2-201ENST00000623684 991 ntBASIC28.96■■■□□ 2.23
RTN4RL1Q86UN2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.94■■■□□ 2.22
RTN4RL1Q86UN2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RTN4RL1Q86UN2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTN4RL1Q86UN2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
RTN4RL1Q86UN2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
RTN4RL1Q86UN2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RTN4RL1Q86UN2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
RTN4RL1Q86UN2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.88■■■□□ 2.21
RTN4RL1Q86UN2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RTN4RL1Q86UN2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTN4RL1Q86UN2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTN4RL1Q86UN2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTN4RL1Q86UN2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.87■■■□□ 2.21
RTN4RL1Q86UN2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTN4RL1Q86UN2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTN4RL1Q86UN2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms