Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01554Q52M75 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01554Q52M75 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC01554Q52M75 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01554Q52M75 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC01554Q52M75 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LINC01554Q52M75 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01554Q52M75 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01554Q52M75 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01554Q52M75 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01554Q52M75 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01554Q52M75 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01554Q52M75 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01554Q52M75 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01554Q52M75 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01554Q52M75 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01554Q52M75 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01554Q52M75 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC01554Q52M75 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01554Q52M75 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC01554Q52M75 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01554Q52M75 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01554Q52M75 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01554Q52M75 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01554Q52M75 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01554Q52M75 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC01554Q52M75 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
LINC01554Q52M75 PKM-203ENST00000389093 2279 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC01554Q52M75 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01554Q52M75 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC01554Q52M75 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01554Q52M75 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01554Q52M75 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01554Q52M75 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01554Q52M75 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01554Q52M75 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01554Q52M75 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC01554Q52M75 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01554Q52M75 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01554Q52M75 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01554Q52M75 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01554Q52M75 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01554Q52M75 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01554Q52M75 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01554Q52M75 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01554Q52M75 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01554Q52M75 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01554Q52M75 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01554Q52M75 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01554Q52M75 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01554Q52M75 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01554Q52M75 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC01554Q52M75 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01554Q52M75 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01554Q52M75 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01554Q52M75 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC01554Q52M75 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
LINC01554Q52M75 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01554Q52M75 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
LINC01554Q52M75 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01554Q52M75 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC01554Q52M75 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC01554Q52M75 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01554Q52M75 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01554Q52M75 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC01554Q52M75 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC01554Q52M75 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01554Q52M75 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01554Q52M75 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01554Q52M75 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC01554Q52M75 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01554Q52M75 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01554Q52M75 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01554Q52M75 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01554Q52M75 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01554Q52M75 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01554Q52M75 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01554Q52M75 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01554Q52M75 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01554Q52M75 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC01554Q52M75 SHF-207ENST00000560540 2062 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC01554Q52M75 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01554Q52M75 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC01554Q52M75 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
LINC01554Q52M75 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01554Q52M75 RARA-203ENST00000394086 2008 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC01554Q52M75 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC01554Q52M75 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01554Q52M75 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01554Q52M75 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01554Q52M75 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01554Q52M75 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LINC01554Q52M75 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01554Q52M75 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC01554Q52M75 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01554Q52M75 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms