Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB4BP61018 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB4BP61018 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB4BP61018 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAB4BP61018 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB4BP61018 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB4BP61018 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB4BP61018 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB4BP61018 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB4BP61018 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB4BP61018 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB4BP61018 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB4BP61018 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB4BP61018 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB4BP61018 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB4BP61018 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAB4BP61018 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB4BP61018 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB4BP61018 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.5■□□□□ 0.87
RAB4BP61018 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB4BP61018 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB4BP61018 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB4BP61018 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB4BP61018 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB4BP61018 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB4BP61018 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB4BP61018 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB4BP61018 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB4BP61018 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB4BP61018 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB4BP61018 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB4BP61018 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RAB4BP61018 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RAB4BP61018 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB4BP61018 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB4BP61018 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB4BP61018 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RAB4BP61018 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB4BP61018 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB4BP61018 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RAB4BP61018 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB4BP61018 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB4BP61018 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB4BP61018 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB4BP61018 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB4BP61018 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB4BP61018 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB4BP61018 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB4BP61018 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB4BP61018 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB4BP61018 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB4BP61018 AC015813.7-201ENST00000623294 581 ntBASIC20.41■□□□□ 0.86
RAB4BP61018 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB4BP61018 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB4BP61018 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAB4BP61018 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB4BP61018 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB4BP61018 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.39■□□□□ 0.86
RAB4BP61018 AC120057.4-201ENST00000624722 1615 ntBASIC20.39■□□□□ 0.86
RAB4BP61018 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB4BP61018 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB4BP61018 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB4BP61018 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB4BP61018 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
RAB4BP61018 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB4BP61018 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB4BP61018 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB4BP61018 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB4BP61018 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB4BP61018 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB4BP61018 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB4BP61018 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB4BP61018 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB4BP61018 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB4BP61018 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB4BP61018 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB4BP61018 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
RAB4BP61018 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB4BP61018 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB4BP61018 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RAB4BP61018 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB4BP61018 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB4BP61018 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB4BP61018 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB4BP61018 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB4BP61018 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB4BP61018 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB4BP61018 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB4BP61018 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB4BP61018 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB4BP61018 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB4BP61018 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB4BP61018 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB4BP61018 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB4BP61018 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB4BP61018 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB4BP61018 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB4BP61018 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB4BP61018 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB4BP61018 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms