Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NDUFS3O75489 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NDUFS3O75489 AL391121.1-201ENST00000607967 1349 ntBASIC26.5■■□□□ 1.83
NDUFS3O75489 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
NDUFS3O75489 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NDUFS3O75489 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.49■■□□□ 1.83
NDUFS3O75489 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NDUFS3O75489 CAHM-201ENST00000604200 896 ntBASIC26.48■■□□□ 1.83
NDUFS3O75489 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.47■■□□□ 1.83
NDUFS3O75489 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.47■■□□□ 1.83
NDUFS3O75489 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NDUFS3O75489 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NDUFS3O75489 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.45■■□□□ 1.83
NDUFS3O75489 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
NDUFS3O75489 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.45■■□□□ 1.82
NDUFS3O75489 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.45■■□□□ 1.82
NDUFS3O75489 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NDUFS3O75489 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
NDUFS3O75489 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NDUFS3O75489 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
NDUFS3O75489 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NDUFS3O75489 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NDUFS3O75489 AL135925.1-201ENST00000605920 1701 ntBASIC26.41■■□□□ 1.82
NDUFS3O75489 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NDUFS3O75489 ST7-AS1-201ENST00000456775 1889 ntBASIC26.4■■□□□ 1.82
NDUFS3O75489 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
NDUFS3O75489 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NDUFS3O75489 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NDUFS3O75489 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NDUFS3O75489 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NDUFS3O75489 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NDUFS3O75489 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NDUFS3O75489 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NDUFS3O75489 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
NDUFS3O75489 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
NDUFS3O75489 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
NDUFS3O75489 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NDUFS3O75489 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NDUFS3O75489 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NDUFS3O75489 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NDUFS3O75489 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NDUFS3O75489 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NDUFS3O75489 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NDUFS3O75489 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.34■■□□□ 1.81
NDUFS3O75489 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
NDUFS3O75489 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NDUFS3O75489 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NDUFS3O75489 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.32■■□□□ 1.8
NDUFS3O75489 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NDUFS3O75489 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.31■■□□□ 1.8
NDUFS3O75489 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NDUFS3O75489 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NDUFS3O75489 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDUFS3O75489 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDUFS3O75489 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDUFS3O75489 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDUFS3O75489 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NDUFS3O75489 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.29■■□□□ 1.8
NDUFS3O75489 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
NDUFS3O75489 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NDUFS3O75489 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.28■■□□□ 1.8
NDUFS3O75489 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NDUFS3O75489 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NDUFS3O75489 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NDUFS3O75489 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NDUFS3O75489 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NDUFS3O75489 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NDUFS3O75489 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.26■■□□□ 1.79
NDUFS3O75489 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS3O75489 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDUFS3O75489 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDUFS3O75489 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
NDUFS3O75489 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NDUFS3O75489 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDUFS3O75489 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.25■■□□□ 1.79
NDUFS3O75489 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NDUFS3O75489 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
NDUFS3O75489 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS3O75489 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.23■■□□□ 1.79
NDUFS3O75489 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NDUFS3O75489 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
NDUFS3O75489 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NDUFS3O75489 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NDUFS3O75489 SUZ12P1-203ENST00000578195 985 ntBASIC26.21■■□□□ 1.79
NDUFS3O75489 ABCB10P3-201ENST00000561950 2166 ntBASIC26.2■■□□□ 1.79
NDUFS3O75489 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NDUFS3O75489 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NDUFS3O75489 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.18■■□□□ 1.78
NDUFS3O75489 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
NDUFS3O75489 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.18■■□□□ 1.78
NDUFS3O75489 AC010864.1-201ENST00000609407 1511 ntBASIC26.18■■□□□ 1.78
NDUFS3O75489 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.17■■□□□ 1.78
NDUFS3O75489 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
NDUFS3O75489 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms