Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PFDN1O60925 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PFDN1O60925 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.17■■□□□ 1.46
PFDN1O60925 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PFDN1O60925 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.16■■□□□ 1.46
PFDN1O60925 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PFDN1O60925 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PFDN1O60925 AC142086.6-201ENST00000621154 1765 ntBASIC24.15■■□□□ 1.46
PFDN1O60925 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.14■■□□□ 1.45
PFDN1O60925 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PFDN1O60925 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.14■■□□□ 1.45
PFDN1O60925 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.13■■□□□ 1.45
PFDN1O60925 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PFDN1O60925 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PFDN1O60925 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PFDN1O60925 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PFDN1O60925 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PFDN1O60925 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PFDN1O60925 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PFDN1O60925 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PFDN1O60925 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PFDN1O60925 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
PFDN1O60925 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PFDN1O60925 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PFDN1O60925 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.08■■□□□ 1.45
PFDN1O60925 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PFDN1O60925 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PFDN1O60925 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PFDN1O60925 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PFDN1O60925 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PFDN1O60925 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PFDN1O60925 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
PFDN1O60925 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PFDN1O60925 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PFDN1O60925 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PFDN1O60925 AL121749.1-202ENST00000609313 2153 ntBASIC24.05■■□□□ 1.44
PFDN1O60925 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PFDN1O60925 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PFDN1O60925 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.03■■□□□ 1.44
PFDN1O60925 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PFDN1O60925 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PFDN1O60925 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PFDN1O60925 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PFDN1O60925 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PFDN1O60925 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PFDN1O60925 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24■■□□□ 1.43
PFDN1O60925 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PFDN1O60925 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PFDN1O60925 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PFDN1O60925 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.98■■□□□ 1.43
PFDN1O60925 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PFDN1O60925 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PFDN1O60925 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
PFDN1O60925 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PFDN1O60925 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.97■■□□□ 1.43
PFDN1O60925 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PFDN1O60925 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PFDN1O60925 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.95■■□□□ 1.43
PFDN1O60925 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PFDN1O60925 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PFDN1O60925 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.95■■□□□ 1.42
PFDN1O60925 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PFDN1O60925 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PFDN1O60925 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PFDN1O60925 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PFDN1O60925 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PFDN1O60925 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.92■■□□□ 1.42
PFDN1O60925 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PFDN1O60925 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PFDN1O60925 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PFDN1O60925 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.91■■□□□ 1.42
PFDN1O60925 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PFDN1O60925 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PFDN1O60925 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
PFDN1O60925 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PFDN1O60925 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PFDN1O60925 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.88■■□□□ 1.41
PFDN1O60925 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PFDN1O60925 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PFDN1O60925 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PFDN1O60925 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PFDN1O60925 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PFDN1O60925 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PFDN1O60925 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PFDN1O60925 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PFDN1O60925 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PFDN1O60925 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PFDN1O60925 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.85■■□□□ 1.41
PFDN1O60925 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PFDN1O60925 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PFDN1O60925 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PFDN1O60925 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
PFDN1O60925 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PFDN1O60925 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PFDN1O60925 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PFDN1O60925 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms