Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.01■□□□□ 0.47
RTL8CO15255 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTL8CO15255 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTL8CO15255 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RTL8CO15255 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18■□□□□ 0.47
RTL8CO15255 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18■□□□□ 0.47
RTL8CO15255 DUX4L11-201ENST00000611504 1267 ntBASIC17.99■□□□□ 0.47
RTL8CO15255 DUX4L12-201ENST00000614593 1267 ntBASIC17.99■□□□□ 0.47
RTL8CO15255 DUX4L14-201ENST00000621227 1267 ntBASIC17.99■□□□□ 0.47
RTL8CO15255 CR559946.2-201ENST00000623684 991 ntBASIC17.99■□□□□ 0.47
RTL8CO15255 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTL8CO15255 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL8CO15255 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.98■□□□□ 0.47
RTL8CO15255 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTL8CO15255 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.97■□□□□ 0.47
RTL8CO15255 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.97■□□□□ 0.47
RTL8CO15255 LINC01971-201ENST00000617888 1048 ntBASIC17.97■□□□□ 0.47
RTL8CO15255 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL8CO15255 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RTL8CO15255 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.96■□□□□ 0.47
RTL8CO15255 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTL8CO15255 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL8CO15255 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTL8CO15255 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.96■□□□□ 0.46
RTL8CO15255 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RTL8CO15255 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTL8CO15255 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC17.93■□□□□ 0.46
RTL8CO15255 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTL8CO15255 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTL8CO15255 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RTL8CO15255 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTL8CO15255 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTL8CO15255 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL8CO15255 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL8CO15255 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.91■□□□□ 0.46
RTL8CO15255 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.91■□□□□ 0.46
RTL8CO15255 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL8CO15255 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RTL8CO15255 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL8CO15255 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL8CO15255 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.9■□□□□ 0.46
RTL8CO15255 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL8CO15255 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL8CO15255 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL8CO15255 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL8CO15255 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL8CO15255 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL8CO15255 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTL8CO15255 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTL8CO15255 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL8CO15255 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL8CO15255 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL8CO15255 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL8CO15255 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL8CO15255 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL8CO15255 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.86■□□□□ 0.45
RTL8CO15255 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL8CO15255 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.86■□□□□ 0.45
RTL8CO15255 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.86■□□□□ 0.45
RTL8CO15255 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTL8CO15255 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTL8CO15255 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL8CO15255 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTL8CO15255 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL8CO15255 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL8CO15255 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.83■□□□□ 0.44
RTL8CO15255 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.83■□□□□ 0.44
RTL8CO15255 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL8CO15255 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL8CO15255 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL8CO15255 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.81■□□□□ 0.44
RTL8CO15255 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTL8CO15255 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.81■□□□□ 0.44
RTL8CO15255 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTL8CO15255 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL8CO15255 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL8CO15255 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL8CO15255 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL8CO15255 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL8CO15255 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.8■□□□□ 0.44
RTL8CO15255 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
RTL8CO15255 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL8CO15255 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL8CO15255 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL8CO15255 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL8CO15255 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
RTL8CO15255 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL8CO15255 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L13-201ENST00000554103 1267 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L15-201ENST00000611059 1267 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L23-201ENST00000615195 1269 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L24-201ENST00000617576 1269 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L22-201ENST00000618238 1269 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L20-201ENST00000619712 1269 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L21-201ENST00000622058 1269 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L10-201ENST00000622460 1267 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 DUX4L25-201ENST00000624915 1269 ntBASIC17.77■□□□□ 0.44
RTL8CO15255 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL8CO15255 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL8CO15255 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms