Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 DUX4L4-201ENST00000566884 1269 ntBASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 HSD17B1P1-201ENST00000590052 955 ntBASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 CA15P2-201ENST00000611168 834 ntBASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 AC074183.2-201ENST00000623112 922 ntBASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.42■□□□□ 0.7
CHCHD3Q9NX63 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 RARRES2P2-201ENST00000394842 485 ntBASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 SNX5-217ENST00000606557 1087 ntBASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 NOC2LP1-202ENST00000452600 2235 ntBASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.41■□□□□ 0.7
CHCHD3Q9NX63 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 AC005703.6-201ENST00000623265 1329 ntBASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHCHD3Q9NX63 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHCHD3Q9NX63 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.39■□□□□ 0.7
CHCHD3Q9NX63 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHCHD3Q9NX63 AC018445.3-201ENST00000624177 1945 ntBASIC19.39■□□□□ 0.7
CHCHD3Q9NX63 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHCHD3Q9NX63 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHCHD3Q9NX63 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms