RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 DCAF8L2P0C7V8 631 aa32.49■■■□□ 2.79
UBXN2A-201ENST00000309033 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
UBXN2A-201ENST00000309033 NISCHQ9Y2I1 1504 aa30.69■■■□□ 2.5
UBXN2A-201ENST00000309033 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
UBXN2A-201ENST00000309033 EHMT2Q96KQ7 1210 aa30.19■■■□□ 2.42
UBXN2A-201ENST00000309033 FAM9AQ8IZU1 332 aaPredicted RBP29.25■■■□□ 2.27
UBXN2A-201ENST00000309033 APLP2Q06481 763 aa29.2■■■□□ 2.27
UBXN2A-201ENST00000309033 TTBK1Q5TCY1 1321 aaPredicted RBP29.16■■■□□ 2.26
UBXN2A-201ENST00000309033 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
UBXN2A-201ENST00000309033 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
UBXN2A-201ENST00000309033 RANGAP1P46060 587 aaPredicted RBP28.78■■■□□ 2.2
UBXN2A-201ENST00000309033 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
UBXN2A-201ENST00000309033 ATP1B4Q9UN42 357 aaPredicted RBP28.39■■■□□ 2.14
UBXN2A-201ENST00000309033 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
UBXN2A-201ENST00000309033 UBTFP17480 764 aaKnown RBP28.22■■■□□ 2.11
UBXN2A-201ENST00000309033 CENPBP07199 599 aaPredicted RBP28.18■■■□□ 2.1
UBXN2A-201ENST00000309033 ZEB1P37275 1124 aaPredicted RBP28.18■■■□□ 2.1
UBXN2A-201ENST00000309033 PPARGC1BQ86YN6 1023 aaKnown RBP28.06■■■□□ 2.08
UBXN2A-201ENST00000309033 ERICH6Q7L0X2 663 aa27.99■■■□□ 2.07
UBXN2A-201ENST00000309033 YTHDC1Q96MU7 727 aaKnown RBP27.94■■■□□ 2.06
UBXN2A-201ENST00000309033 NEFLP07196 543 aa27.61■■■□□ 2.01
UBXN2A-201ENST00000309033 TRIM26Q12899 539 aaPredicted RBP27.55■■■□□ 2
UBXN2A-201ENST00000309033 ITGAEP38570 1179 aa27.49■■□□□ 1.99
UBXN2A-201ENST00000309033 LOC105371045A0A1W2PR82 267 aa27.48■■□□□ 1.99
UBXN2A-201ENST00000309033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
UBXN2A-201ENST00000309033 HNRNPUL2Q1KMD3 747 aaKnown RBP27.29■■□□□ 1.96
UBXN2A-201ENST00000309033 HRCP23327 699 aa27.28■■□□□ 1.96
UBXN2A-201ENST00000309033 POLR3GLQ9BT43 218 aa27.27■■□□□ 1.96
UBXN2A-201ENST00000309033 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
UBXN2A-201ENST00000309033 MYT1LQ9UL68 1186 aa27.2■■□□□ 1.95
UBXN2A-201ENST00000309033 CNGB1Q14028 1251 aaPredicted RBP27.12■■□□□ 1.93
UBXN2A-201ENST00000309033 DAXXQ9UER7 740 aaPredicted RBP26.8■■□□□ 1.88
UBXN2A-201ENST00000309033 MYT1Q01538 1121 aa26.74■■□□□ 1.87
UBXN2A-201ENST00000309033 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.87
UBXN2A-201ENST00000309033 FAM50AQ14320 339 aaKnown RBP26.7■■□□□ 1.87
UBXN2A-201ENST00000309033 SLC4A1APQ9BWU0 796 aaKnown RBP26.69■■□□□ 1.86
UBXN2A-201ENST00000309033 DIEXFQ68CQ4 756 aaKnown RBP26.68■■□□□ 1.86
UBXN2A-201ENST00000309033 ABCC9O60706 1549 aa26.62■■□□□ 1.85
UBXN2A-201ENST00000309033 NEUROD1Q13562 356 aa26.54■■□□□ 1.84
UBXN2A-201ENST00000309033 TRIM52Q96A61 297 aa26.53■■□□□ 1.84
UBXN2A-201ENST00000309033 CLSPNQ9HAW4 1339 aa26.34■■□□□ 1.81
UBXN2A-201ENST00000309033 BCANQ96GW7 911 aa26.31■■□□□ 1.8
UBXN2A-201ENST00000309033 ZNF326Q5BKZ1 582 aaKnown RBP26.3■■□□□ 1.8
UBXN2A-201ENST00000309033 ZNF316A6NFI3 1004 aaPredicted RBP26.24■■□□□ 1.79
UBXN2A-201ENST00000309033 FBLN2P98095 1184 aa26.2■■□□□ 1.78
UBXN2A-201ENST00000309033 RTL5Q5HYW3 569 aaPredicted RBP26.16■■□□□ 1.78
UBXN2A-201ENST00000309033 GTF3C3Q9Y5Q9 886 aa26.16■■□□□ 1.78
UBXN2A-201ENST00000309033 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
UBXN2A-201ENST00000309033 ARID3CA6NKF2 412 aa26.12■■□□□ 1.77
UBXN2A-201ENST00000309033 ANP32CO43423 234 aa26.12■■□□□ 1.77
UBXN2A-201ENST00000309033 CSRNP3Q8WYN3 585 aa25.91■■□□□ 1.74
UBXN2A-201ENST00000309033 BCL11AQ9H165 835 aa25.87■■□□□ 1.73
UBXN2A-201ENST00000309033 CDK11AQ9UQ88 783 aaPredicted RBP25.86■■□□□ 1.73
UBXN2A-201ENST00000309033 ZNF777Q9ULD5 760 aaPredicted RBP25.84■■□□□ 1.73
UBXN2A-201ENST00000309033 SLC24A1O60721 1099 aa25.77■■□□□ 1.72
UBXN2A-201ENST00000309033 CANXP27824 592 aaKnown RBP25.77■■□□□ 1.72
UBXN2A-201ENST00000309033 ZBTB47Q9UFB7 747 aaPredicted RBP25.73■■□□□ 1.71
UBXN2A-201ENST00000309033 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
UBXN2A-201ENST00000309033 ACIN1Q9UKV3 1341 aaKnown RBP25.69■■□□□ 1.7
UBXN2A-201ENST00000309033 NEFMP07197 916 aa25.54■■□□□ 1.68
UBXN2A-201ENST00000309033 NPM2Q86SE8 214 aaKnown RBP25.5■■□□□ 1.67
UBXN2A-201ENST00000309033 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
UBXN2A-201ENST00000309033 FKBP8Q14318 412 aa25.45■■□□□ 1.66
UBXN2A-201ENST00000309033 CHGAP10645 457 aaKnown RBP25.43■■□□□ 1.66
UBXN2A-201ENST00000309033 DDX10Q13206 875 aaKnown RBP25.43■■□□□ 1.66
UBXN2A-201ENST00000309033 ANP32AP39687 249 aaKnown RBP25.41■■□□□ 1.66
UBXN2A-201ENST00000309033 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
UBXN2A-201ENST00000309033 FAM9BQ8IZU0 186 aa25.39■■□□□ 1.65
UBXN2A-201ENST00000309033 HNRNPUQ00839 825 aaKnown RBP eCLIP25.37■■□□□ 1.65
UBXN2A-201ENST00000309033 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
UBXN2A-201ENST00000309033 SALL2Q9Y467 1007 aaPredicted RBP25.36■■□□□ 1.65
UBXN2A-201ENST00000309033 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
UBXN2A-201ENST00000309033 DCAF1Q9Y4B6 1507 aa25.33■■□□□ 1.65
UBXN2A-201ENST00000309033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.64
UBXN2A-201ENST00000309033 STAG3Q9UJ98 1225 aa25.27■■□□□ 1.64
UBXN2A-201ENST00000309033 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
UBXN2A-201ENST00000309033 HIRIP3Q9BW71 556 aaPredicted RBP25.18■■□□□ 1.62
UBXN2A-201ENST00000309033 KDM2AQ9Y2K7 1162 aa25.17■■□□□ 1.62
UBXN2A-201ENST00000309033 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
UBXN2A-201ENST00000309033 NPM1P06748 294 aaKnown RBP eCLIP25.09■■□□□ 1.61
UBXN2A-201ENST00000309033 MTUS2Q5JR59 1369 aa25.07■■□□□ 1.6
UBXN2A-201ENST00000309033 HSP90AA1P07900 732 aaKnown RBP25.07■■□□□ 1.6
UBXN2A-201ENST00000309033 MIER1Q8N108 512 aa25.06■■□□□ 1.6
UBXN2A-201ENST00000309033 IRX6P78412 446 aaPredicted RBP25.04■■□□□ 1.6
UBXN2A-201ENST00000309033 MRS2Q9HD23 443 aa25.04■■□□□ 1.6
UBXN2A-201ENST00000309033 CLIP1P30622 1438 aa25.03■■□□□ 1.6
UBXN2A-201ENST00000309033 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
UBXN2A-201ENST00000309033 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
UBXN2A-201ENST00000309033 TSPY4P0CV99 314 aa25■■□□□ 1.59
UBXN2A-201ENST00000309033 TSPY10P0CW01 314 aa25■■□□□ 1.59
UBXN2A-201ENST00000309033 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
UBXN2A-201ENST00000309033 RRP7BPQ9NSQ0 103 aa25■■□□□ 1.59
UBXN2A-201ENST00000309033 WDR43Q15061 677 aaKnown RBP eCLIP24.99■■□□□ 1.59
UBXN2A-201ENST00000309033 UPF2Q9HAU5 1272 aaKnown RBP24.98■■□□□ 1.59
UBXN2A-201ENST00000309033 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.59
UBXN2A-201ENST00000309033 NBR1Q14596 966 aa24.93■■□□□ 1.58
UBXN2A-201ENST00000309033 SCAF1Q9H7N4 1312 aaKnown RBP24.89■■□□□ 1.57
UBXN2A-201ENST00000309033 ANP32BQ92688 251 aaKnown RBP24.88■■□□□ 1.57
UBXN2A-201ENST00000309033 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.87■■□□□ 1.57
UBXN2A-201ENST00000309033 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms