RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
NECAB1-201ENST00000417640 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
NECAB1-201ENST00000417640 SUPT5HO00267 1087 aaKnown RBP30.89■■■□□ 2.54
NECAB1-201ENST00000417640 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
NECAB1-201ENST00000417640 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
NECAB1-201ENST00000417640 PCGF6Q9BYE7 350 aa29.31■■■□□ 2.28
NECAB1-201ENST00000417640 PELP1Q8IZL8 1130 aaKnown RBP29.29■■■□□ 2.28
NECAB1-201ENST00000417640 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
NECAB1-201ENST00000417640 APLP2Q06481 763 aa29.02■■■□□ 2.24
NECAB1-201ENST00000417640 ZEB1P37275 1124 aaPredicted RBP28.86■■■□□ 2.21
NECAB1-201ENST00000417640 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
NECAB1-201ENST00000417640 CENPBP07199 599 aaPredicted RBP28.66■■■□□ 2.18
NECAB1-201ENST00000417640 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
NECAB1-201ENST00000417640 CCER1Q8TC90 406 aaPredicted RBP28.53■■■□□ 2.16
NECAB1-201ENST00000417640 HRCP23327 699 aa28.21■■■□□ 2.11
NECAB1-201ENST00000417640 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
NECAB1-201ENST00000417640 RANGAP1P46060 587 aaPredicted RBP28.15■■■□□ 2.1
NECAB1-201ENST00000417640 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
NECAB1-201ENST00000417640 ERICH6Q7L0X2 663 aa27.98■■■□□ 2.07
NECAB1-201ENST00000417640 MYT1Q01538 1121 aa27.94■■■□□ 2.06
NECAB1-201ENST00000417640 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
NECAB1-201ENST00000417640 YTHDC1Q96MU7 727 aaKnown RBP27.91■■■□□ 2.06
NECAB1-201ENST00000417640 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
NECAB1-201ENST00000417640 ATP1B4Q9UN42 357 aaPredicted RBP27.78■■■□□ 2.04
NECAB1-201ENST00000417640 LOC105371045A0A1W2PR82 267 aa27.77■■■□□ 2.04
NECAB1-201ENST00000417640 NEFLP07196 543 aa27.76■■■□□ 2.03
NECAB1-201ENST00000417640 HNRNPUL2Q1KMD3 747 aaKnown RBP27.26■■□□□ 1.95
NECAB1-201ENST00000417640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.19■■□□□ 1.94
NECAB1-201ENST00000417640 ITGAEP38570 1179 aa27.18■■□□□ 1.94
NECAB1-201ENST00000417640 DIEXFQ68CQ4 756 aaKnown RBP27.16■■□□□ 1.94
NECAB1-201ENST00000417640 MYT1LQ9UL68 1186 aa26.89■■□□□ 1.9
NECAB1-201ENST00000417640 POLR3GLQ9BT43 218 aa26.79■■□□□ 1.88
NECAB1-201ENST00000417640 GTF3C3Q9Y5Q9 886 aa26.74■■□□□ 1.87
NECAB1-201ENST00000417640 DAXXQ9UER7 740 aaPredicted RBP26.73■■□□□ 1.87
NECAB1-201ENST00000417640 ABCC9O60706 1549 aa26.69■■□□□ 1.86
NECAB1-201ENST00000417640 CNGB1Q14028 1251 aaPredicted RBP26.56■■□□□ 1.84
NECAB1-201ENST00000417640 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
NECAB1-201ENST00000417640 FAM50AQ14320 339 aaKnown RBP26.52■■□□□ 1.84
NECAB1-201ENST00000417640 ACIN1Q9UKV3 1341 aaKnown RBP26.49■■□□□ 1.83
NECAB1-201ENST00000417640 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
NECAB1-201ENST00000417640 RTL5Q5HYW3 569 aaPredicted RBP26.39■■□□□ 1.82
NECAB1-201ENST00000417640 BCANQ96GW7 911 aa26.36■■□□□ 1.81
NECAB1-201ENST00000417640 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
NECAB1-201ENST00000417640 ANP32CO43423 234 aa26.32■■□□□ 1.8
NECAB1-201ENST00000417640 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
NECAB1-201ENST00000417640 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
NECAB1-201ENST00000417640 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
NECAB1-201ENST00000417640 CDK11AQ9UQ88 783 aaPredicted RBP26.18■■□□□ 1.78
NECAB1-201ENST00000417640 CLSPNQ9HAW4 1339 aa26.14■■□□□ 1.78
NECAB1-201ENST00000417640 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
NECAB1-201ENST00000417640 SLC4A1APQ9BWU0 796 aaKnown RBP26.08■■□□□ 1.77
NECAB1-201ENST00000417640 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
NECAB1-201ENST00000417640 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
NECAB1-201ENST00000417640 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
NECAB1-201ENST00000417640 SCAF1Q9H7N4 1312 aaKnown RBP25.78■■□□□ 1.72
NECAB1-201ENST00000417640 FKBP8Q14318 412 aa25.77■■□□□ 1.72
NECAB1-201ENST00000417640 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
NECAB1-201ENST00000417640 MYO15BQ96JP2 1530 aa25.74■■□□□ 1.71
NECAB1-201ENST00000417640 ANP32AP39687 249 aaKnown RBP25.71■■□□□ 1.71
NECAB1-201ENST00000417640 TONSLQ96HA7 1378 aa25.66■■□□□ 1.7
NECAB1-201ENST00000417640 DDX10Q13206 875 aaKnown RBP25.65■■□□□ 1.7
NECAB1-201ENST00000417640 FBLN2P98095 1184 aa25.64■■□□□ 1.7
NECAB1-201ENST00000417640 HNRNPUQ00839 825 aaKnown RBP eCLIP25.59■■□□□ 1.69
NECAB1-201ENST00000417640 MIER1Q8N108 512 aa25.58■■□□□ 1.69
NECAB1-201ENST00000417640 ARID3CA6NKF2 412 aa25.55■■□□□ 1.68
NECAB1-201ENST00000417640 CANXP27824 592 aaKnown RBP25.54■■□□□ 1.68
NECAB1-201ENST00000417640 ZBTB47Q9UFB7 747 aaPredicted RBP25.48■■□□□ 1.67
NECAB1-201ENST00000417640 NPM2Q86SE8 214 aaKnown RBP25.47■■□□□ 1.67
NECAB1-201ENST00000417640 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
NECAB1-201ENST00000417640 FAM9BQ8IZU0 186 aa25.43■■□□□ 1.66
NECAB1-201ENST00000417640 CLIP1P30622 1438 aa25.41■■□□□ 1.66
NECAB1-201ENST00000417640 NEFMP07197 916 aa25.36■■□□□ 1.65
NECAB1-201ENST00000417640 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
NECAB1-201ENST00000417640 CEP162Q5TB80 1403 aa25.32■■□□□ 1.64
NECAB1-201ENST00000417640 EEA1Q15075 1411 aa25.31■■□□□ 1.64
NECAB1-201ENST00000417640 ESF1Q9H501 851 aaKnown RBP25.31■■□□□ 1.64
NECAB1-201ENST00000417640 CCDC136Q96JN2 1154 aa25.27■■□□□ 1.64
NECAB1-201ENST00000417640 SLC24A1O60721 1099 aa25.24■■□□□ 1.63
NECAB1-201ENST00000417640 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
NECAB1-201ENST00000417640 MRS2Q9HD23 443 aa25.24■■□□□ 1.63
NECAB1-201ENST00000417640 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
NECAB1-201ENST00000417640 TMC1Q8TDI8 760 aa25.23■■□□□ 1.63
NECAB1-201ENST00000417640 BCL11AQ9H165 835 aa25.19■■□□□ 1.62
NECAB1-201ENST00000417640 HIRIP3Q9BW71 556 aaPredicted RBP25.17■■□□□ 1.62
NECAB1-201ENST00000417640 MTUS2Q5JR59 1369 aa25.15■■□□□ 1.62
NECAB1-201ENST00000417640 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
NECAB1-201ENST00000417640 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
NECAB1-201ENST00000417640 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
NECAB1-201ENST00000417640 NPM1P06748 294 aaKnown RBP eCLIP25.13■■□□□ 1.61
NECAB1-201ENST00000417640 IRX6P78412 446 aaPredicted RBP25.12■■□□□ 1.61
NECAB1-201ENST00000417640 NBR1Q14596 966 aa25.11■■□□□ 1.61
NECAB1-201ENST00000417640 UPF2Q9HAU5 1272 aaKnown RBP25.11■■□□□ 1.61
NECAB1-201ENST00000417640 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
NECAB1-201ENST00000417640 EIF5BO60841 1220 aaKnown RBP25.06■■□□□ 1.6
NECAB1-201ENST00000417640 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.04■■□□□ 1.6
NECAB1-201ENST00000417640 NACADO15069 1562 aa25.02■■□□□ 1.6
NECAB1-201ENST00000417640 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
NECAB1-201ENST00000417640 STAG3Q9UJ98 1225 aa25.01■■□□□ 1.59
NECAB1-201ENST00000417640 ANP32BQ92688 251 aaKnown RBP24.99■■□□□ 1.59
NECAB1-201ENST00000417640 HSP90AA1P07900 732 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms