RNA–Protein interactions for RNA: ENST00000350490.11

MARK2-201, Transcript of microtubule affinity regulating kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MARK2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK2-201ENST00000350490 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
MARK2-201ENST00000350490 CCDC180Q9P1Z9 1646 aa33.37■■■□□ 2.93
MARK2-201ENST00000350490 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
MARK2-201ENST00000350490 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
MARK2-201ENST00000350490 ABCC9O60706 1549 aa32.53■■■□□ 2.8
MARK2-201ENST00000350490 SUPT5HO00267 1087 aaKnown RBP32.42■■■□□ 2.78
MARK2-201ENST00000350490 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.74
MARK2-201ENST00000350490 HRCP23327 699 aa31.7■■■□□ 2.66
MARK2-201ENST00000350490 PCGF6Q9BYE7 350 aa31.63■■■□□ 2.65
MARK2-201ENST00000350490 PPARGC1BQ86YN6 1023 aaKnown RBP31.6■■■□□ 2.65
MARK2-201ENST00000350490 MYO15BQ96JP2 1530 aa31.56■■■□□ 2.64
MARK2-201ENST00000350490 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
MARK2-201ENST00000350490 CHIC1Q5VXU3 224 aa31.42■■■□□ 2.62
MARK2-201ENST00000350490 NACADO15069 1562 aa31.27■■■□□ 2.6
MARK2-201ENST00000350490 SCRIBQ14160 1630 aa31.18■■■□□ 2.58
MARK2-201ENST00000350490 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
MARK2-201ENST00000350490 LOC105371045A0A1W2PR82 267 aa31.02■■■□□ 2.56
MARK2-201ENST00000350490 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
MARK2-201ENST00000350490 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
MARK2-201ENST00000350490 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
MARK2-201ENST00000350490 TRIM26Q12899 539 aaPredicted RBP30.31■■■□□ 2.44
MARK2-201ENST00000350490 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
MARK2-201ENST00000350490 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
MARK2-201ENST00000350490 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
MARK2-201ENST00000350490 SCAF1Q9H7N4 1312 aaKnown RBP29.97■■■□□ 2.39
MARK2-201ENST00000350490 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
MARK2-201ENST00000350490 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
MARK2-201ENST00000350490 TRIM41Q8WV44 630 aa29.75■■■□□ 2.35
MARK2-201ENST00000350490 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
MARK2-201ENST00000350490 ZEB1P37275 1124 aaPredicted RBP29.65■■■□□ 2.34
MARK2-201ENST00000350490 WIZO95785 1651 aa29.65■■■□□ 2.34
MARK2-201ENST00000350490 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
MARK2-201ENST00000350490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.49■■■□□ 2.31
MARK2-201ENST00000350490 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
MARK2-201ENST00000350490 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
MARK2-201ENST00000350490 TTBK1Q5TCY1 1321 aaPredicted RBP29.42■■■□□ 2.3
MARK2-201ENST00000350490 NEUROD1Q13562 356 aa29.34■■■□□ 2.29
MARK2-201ENST00000350490 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
MARK2-201ENST00000350490 CCER1Q8TC90 406 aaPredicted RBP29.24■■■□□ 2.27
MARK2-201ENST00000350490 CC2D2AQ9P2K1 1620 aa29.19■■■□□ 2.26
MARK2-201ENST00000350490 ACIN1Q9UKV3 1341 aaKnown RBP29.18■■■□□ 2.26
MARK2-201ENST00000350490 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
MARK2-201ENST00000350490 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
MARK2-201ENST00000350490 GTF3C3Q9Y5Q9 886 aa29.14■■■□□ 2.25
MARK2-201ENST00000350490 SMARCA2P51531 1590 aa29.1■■■□□ 2.25
MARK2-201ENST00000350490 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
MARK2-201ENST00000350490 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
MARK2-201ENST00000350490 DIEXFQ68CQ4 756 aaKnown RBP29.01■■■□□ 2.24
MARK2-201ENST00000350490 CCDC88BA6NC98 1476 aa29■■■□□ 2.23
MARK2-201ENST00000350490 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
MARK2-201ENST00000350490 YTHDC1Q96MU7 727 aaKnown RBP28.87■■■□□ 2.21
MARK2-201ENST00000350490 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
MARK2-201ENST00000350490 CENPBP07199 599 aaPredicted RBP28.74■■■□□ 2.19
MARK2-201ENST00000350490 NESP48681 1621 aa28.47■■■□□ 2.15
MARK2-201ENST00000350490 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
MARK2-201ENST00000350490 MIER1Q8N108 512 aa28.43■■■□□ 2.14
MARK2-201ENST00000350490 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
MARK2-201ENST00000350490 HNRNPUL2Q1KMD3 747 aaKnown RBP28.4■■■□□ 2.14
MARK2-201ENST00000350490 UBTFP17480 764 aaKnown RBP28.38■■■□□ 2.13
MARK2-201ENST00000350490 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
MARK2-201ENST00000350490 CFTRP13569 1480 aa28.3■■■□□ 2.12
MARK2-201ENST00000350490 CEP162Q5TB80 1403 aa28.29■■■□□ 2.12
MARK2-201ENST00000350490 SOGA1O94964 1423 aa28.27■■■□□ 2.12
MARK2-201ENST00000350490 RANGAP1P46060 587 aaPredicted RBP28.24■■■□□ 2.11
MARK2-201ENST00000350490 RUSC2Q8N2Y8 1516 aa28.17■■■□□ 2.1
MARK2-201ENST00000350490 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
MARK2-201ENST00000350490 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
MARK2-201ENST00000350490 CSRNP3Q8WYN3 585 aa28.07■■■□□ 2.08
MARK2-201ENST00000350490 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
MARK2-201ENST00000350490 MYT1Q01538 1121 aa28■■■□□ 2.07
MARK2-201ENST00000350490 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
MARK2-201ENST00000350490 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
MARK2-201ENST00000350490 CUX1P39880 1505 aa27.92■■■□□ 2.06
MARK2-201ENST00000350490 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
MARK2-201ENST00000350490 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
MARK2-201ENST00000350490 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
MARK2-201ENST00000350490 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
MARK2-201ENST00000350490 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
MARK2-201ENST00000350490 TOP2BQ02880 1626 aa27.76■■■□□ 2.03
MARK2-201ENST00000350490 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
MARK2-201ENST00000350490 TOPBP1Q92547 1522 aa27.7■■■□□ 2.02
MARK2-201ENST00000350490 APLP2Q06481 763 aa27.7■■■□□ 2.02
MARK2-201ENST00000350490 SUPT16HQ9Y5B9 1047 aaKnown RBP27.7■■■□□ 2.02
MARK2-201ENST00000350490 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
MARK2-201ENST00000350490 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
MARK2-201ENST00000350490 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
MARK2-201ENST00000350490 BIVM-ERCC5R4GMW8 1640 aa27.64■■■□□ 2.02
MARK2-201ENST00000350490 KCNH8Q96L42 1107 aa27.61■■■□□ 2.01
MARK2-201ENST00000350490 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
MARK2-201ENST00000350490 CLIP1P30622 1438 aa27.59■■■□□ 2.01
MARK2-201ENST00000350490 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
MARK2-201ENST00000350490 BCANQ96GW7 911 aa27.57■■■□□ 2
MARK2-201ENST00000350490 MRC2Q9UBG0 1479 aa27.55■■■□□ 2
MARK2-201ENST00000350490 SLC24A1O60721 1099 aa27.55■■■□□ 2
MARK2-201ENST00000350490 ITGAEP38570 1179 aa27.52■■■□□ 2
MARK2-201ENST00000350490 CUX2O14529 1486 aa27.52■■■□□ 2
MARK2-201ENST00000350490 TDRD9Q8NDG6 1382 aaKnown RBP27.51■■□□□ 1.99
MARK2-201ENST00000350490 TSHZ2Q9NRE2 1034 aa27.48■■□□□ 1.99
MARK2-201ENST00000350490 EEA1Q15075 1411 aa27.47■■□□□ 1.99
MARK2-201ENST00000350490 KANK4Q5T7N3 995 aaPredicted RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms