Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD4Q9H0A8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD4Q9H0A8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 AC003102.1-202ENST00000563394 1796 ntBASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD4Q9H0A8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 AC010525.1-201ENST00000585559 441 ntBASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD4Q9H0A8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 MIR3621-201ENST00000580529 85 ntBASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD4Q9H0A8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD4Q9H0A8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD4Q9H0A8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.52■□□□□ 0.55
COMMD4Q9H0A8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.55
COMMD4Q9H0A8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.52■□□□□ 0.55
COMMD4Q9H0A8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms