RNA–Protein interactions for RNA: ENST00000430297.6

RETREG2-203, Transcript of reticulophagy regulator family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG2, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-203ENST00000430297 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
RETREG2-203ENST00000430297 DCAF8L2P0C7V8 631 aa34.28■■■■□ 3.08
RETREG2-203ENST00000430297 SUPT5HO00267 1087 aaKnown RBP32.93■■■□□ 2.86
RETREG2-203ENST00000430297 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
RETREG2-203ENST00000430297 EHMT2Q96KQ7 1210 aa31.3■■■□□ 2.6
RETREG2-203ENST00000430297 FAM9AQ8IZU1 332 aaPredicted RBP30.88■■■□□ 2.53
RETREG2-203ENST00000430297 PCGF6Q9BYE7 350 aa30.59■■■□□ 2.49
RETREG2-203ENST00000430297 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
RETREG2-203ENST00000430297 APLP2Q06481 763 aa30.43■■■□□ 2.46
RETREG2-203ENST00000430297 TTBK1Q5TCY1 1321 aaPredicted RBP30.2■■■□□ 2.43
RETREG2-203ENST00000430297 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
RETREG2-203ENST00000430297 RANGAP1P46060 587 aaPredicted RBP29.95■■■□□ 2.39
RETREG2-203ENST00000430297 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
RETREG2-203ENST00000430297 ZEB1P37275 1124 aaPredicted RBP29.78■■■□□ 2.36
RETREG2-203ENST00000430297 CCER1Q8TC90 406 aaPredicted RBP29.71■■■□□ 2.35
RETREG2-203ENST00000430297 LOC105371045A0A1W2PR82 267 aa29.7■■■□□ 2.34
RETREG2-203ENST00000430297 PPARGC1BQ86YN6 1023 aaKnown RBP29.56■■■□□ 2.32
RETREG2-203ENST00000430297 ABCC9O60706 1549 aa29.53■■■□□ 2.32
RETREG2-203ENST00000430297 TRIM26Q12899 539 aaPredicted RBP29.52■■■□□ 2.32
RETREG2-203ENST00000430297 ATP1B4Q9UN42 357 aaPredicted RBP29.47■■■□□ 2.31
RETREG2-203ENST00000430297 PELP1Q8IZL8 1130 aaKnown RBP29.3■■■□□ 2.28
RETREG2-203ENST00000430297 HRCP23327 699 aa29.29■■■□□ 2.28
RETREG2-203ENST00000430297 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
RETREG2-203ENST00000430297 CENPBP07199 599 aaPredicted RBP29.14■■■□□ 2.26
RETREG2-203ENST00000430297 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
RETREG2-203ENST00000430297 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
RETREG2-203ENST00000430297 CCDC180Q9P1Z9 1646 aa28.77■■■□□ 2.2
RETREG2-203ENST00000430297 ITGAEP38570 1179 aa28.77■■■□□ 2.2
RETREG2-203ENST00000430297 YTHDC1Q96MU7 727 aaKnown RBP28.7■■■□□ 2.18
RETREG2-203ENST00000430297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.62■■■□□ 2.17
RETREG2-203ENST00000430297 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
RETREG2-203ENST00000430297 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
RETREG2-203ENST00000430297 NEFLP07196 543 aa28.28■■■□□ 2.12
RETREG2-203ENST00000430297 DIEXFQ68CQ4 756 aaKnown RBP28.18■■■□□ 2.1
RETREG2-203ENST00000430297 FAM50AQ14320 339 aaKnown RBP28.16■■■□□ 2.1
RETREG2-203ENST00000430297 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
RETREG2-203ENST00000430297 DCAF1Q9Y4B6 1507 aa27.99■■■□□ 2.07
RETREG2-203ENST00000430297 POLR3GLQ9BT43 218 aa27.97■■■□□ 2.07
RETREG2-203ENST00000430297 ERICH6Q7L0X2 663 aa27.96■■■□□ 2.07
RETREG2-203ENST00000430297 MYT1LQ9UL68 1186 aa27.96■■■□□ 2.07
RETREG2-203ENST00000430297 P3H3Q8IVL6 736 aa27.87■■■□□ 2.05
RETREG2-203ENST00000430297 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
RETREG2-203ENST00000430297 NEUROD1Q13562 356 aa27.85■■■□□ 2.05
RETREG2-203ENST00000430297 MYO15BQ96JP2 1530 aa27.85■■■□□ 2.05
RETREG2-203ENST00000430297 TRIM52Q96A61 297 aa27.81■■■□□ 2.04
RETREG2-203ENST00000430297 NACADO15069 1562 aa27.8■■■□□ 2.04
RETREG2-203ENST00000430297 CNGB1Q14028 1251 aaPredicted RBP27.77■■■□□ 2.04
RETREG2-203ENST00000430297 ZNF316A6NFI3 1004 aaPredicted RBP27.72■■■□□ 2.03
RETREG2-203ENST00000430297 FBLN2P98095 1184 aa27.71■■■□□ 2.03
RETREG2-203ENST00000430297 ARID3CA6NKF2 412 aa27.55■■■□□ 2
RETREG2-203ENST00000430297 CECR2Q9BXF3 1484 aa27.51■■■□□ 2
RETREG2-203ENST00000430297 GTF3C3Q9Y5Q9 886 aa27.43■■□□□ 1.98
RETREG2-203ENST00000430297 EEA1Q15075 1411 aa27.4■■□□□ 1.98
RETREG2-203ENST00000430297 CLIP1P30622 1438 aa27.39■■□□□ 1.98
RETREG2-203ENST00000430297 ANP32CO43423 234 aa27.39■■□□□ 1.97
RETREG2-203ENST00000430297 ZNF326Q5BKZ1 582 aaKnown RBP27.38■■□□□ 1.97
RETREG2-203ENST00000430297 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
RETREG2-203ENST00000430297 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
RETREG2-203ENST00000430297 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
RETREG2-203ENST00000430297 CEP162Q5TB80 1403 aa27.31■■□□□ 1.96
RETREG2-203ENST00000430297 BAZ1BQ9UIG0 1483 aaKnown RBP27.3■■□□□ 1.96
RETREG2-203ENST00000430297 GOLGA3Q08378 1498 aa27.26■■□□□ 1.95
RETREG2-203ENST00000430297 MYT1Q01538 1121 aa27.26■■□□□ 1.95
RETREG2-203ENST00000430297 ZNF777Q9ULD5 760 aaPredicted RBP27.26■■□□□ 1.95
RETREG2-203ENST00000430297 ACIN1Q9UKV3 1341 aaKnown RBP27.25■■□□□ 1.95
RETREG2-203ENST00000430297 SLC4A1APQ9BWU0 796 aaKnown RBP27.23■■□□□ 1.95
RETREG2-203ENST00000430297 TNIKQ9UKE5 1360 aa27.19■■□□□ 1.94
RETREG2-203ENST00000430297 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
RETREG2-203ENST00000430297 BCANQ96GW7 911 aa27.11■■□□□ 1.93
RETREG2-203ENST00000430297 TONSLQ96HA7 1378 aa27.09■■□□□ 1.93
RETREG2-203ENST00000430297 CEP164Q9UPV0 1460 aa27.05■■□□□ 1.92
RETREG2-203ENST00000430297 CHIC2Q9UKJ5 165 aa27.04■■□□□ 1.92
RETREG2-203ENST00000430297 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
RETREG2-203ENST00000430297 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
RETREG2-203ENST00000430297 DAXXQ9UER7 740 aaPredicted RBP27.03■■□□□ 1.92
RETREG2-203ENST00000430297 SOGA1O94964 1423 aa26.98■■□□□ 1.91
RETREG2-203ENST00000430297 DDX10Q13206 875 aaKnown RBP26.96■■□□□ 1.91
RETREG2-203ENST00000430297 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.9
RETREG2-203ENST00000430297 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.89
RETREG2-203ENST00000430297 MIER1Q8N108 512 aa26.8■■□□□ 1.88
RETREG2-203ENST00000430297 ABCC8Q09428 1581 aa26.79■■□□□ 1.88
RETREG2-203ENST00000430297 CLSPNQ9HAW4 1339 aa26.76■■□□□ 1.87
RETREG2-203ENST00000430297 TSPY4P0CV99 314 aa26.75■■□□□ 1.87
RETREG2-203ENST00000430297 TSPY10P0CW01 314 aa26.75■■□□□ 1.87
RETREG2-203ENST00000430297 WIZO95785 1651 aa26.74■■□□□ 1.87
RETREG2-203ENST00000430297 RRP7BPQ9NSQ0 103 aa26.74■■□□□ 1.87
RETREG2-203ENST00000430297 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
RETREG2-203ENST00000430297 HNRNPUQ00839 825 aaKnown RBP eCLIP26.66■■□□□ 1.86
RETREG2-203ENST00000430297 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
RETREG2-203ENST00000430297 CUX2O14529 1486 aa26.64■■□□□ 1.85
RETREG2-203ENST00000430297 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
RETREG2-203ENST00000430297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.63■■□□□ 1.85
RETREG2-203ENST00000430297 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
RETREG2-203ENST00000430297 FKBP8Q14318 412 aa26.61■■□□□ 1.85
RETREG2-203ENST00000430297 FAM9BQ8IZU0 186 aa26.59■■□□□ 1.85
RETREG2-203ENST00000430297 NPM1P06748 294 aaKnown RBP eCLIP26.59■■□□□ 1.85
RETREG2-203ENST00000430297 PLEKHD1A6NEE1 506 aa26.56■■□□□ 1.84
RETREG2-203ENST00000430297 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
RETREG2-203ENST00000430297 KDM2AQ9Y2K7 1162 aa26.54■■□□□ 1.84
RETREG2-203ENST00000430297 SCAF1Q9H7N4 1312 aaKnown RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms